Gene : Bradi5g26047 B. distachyon v3.1
Defline:  (1 of 1) PTHR33925:SF2 - PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC Genomic Order:  3098
Name:  ? Bradi5g26047 Secondary Identifier:  ? PAC:32808631
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g26047 0.5kb upstream 0.5kb upstream 5535 true Bd5: 27340539-27346073 Brachypodium distachyon
Bradi5g26047 0.5kb upstream 0.5kb upstream 500 false Bd5: 27345574-27346073 Brachypodium distachyon
Bradi5g26047 0.5kb downstream 0.5kb downstream 5535 true Bd5: 27340039-27345573 Brachypodium distachyon
Bradi5g26047 0.5kb downstream 0.5kb downstream 500 false Bd5: 27340039-27340538 Brachypodium distachyon
Bradi5g26047 1.0kb upstream 1.0kb upstream 6035 true Bd5: 27340539-27346573 Brachypodium distachyon
Bradi5g26047 1.0kb upstream 1.0kb upstream 1000 false Bd5: 27345574-27346573 Brachypodium distachyon
Bradi5g26047 1.0kb downstream 1.0kb downstream 6035 true Bd5: 27339539-27345573 Brachypodium distachyon
Bradi5g26047 1.0kb downstream 1.0kb downstream 1000 false Bd5: 27339539-27340538 Brachypodium distachyon
Bradi5g26047 2.0kb upstream 2.0kb upstream 7035 true Bd5: 27340539-27347573 Brachypodium distachyon
Bradi5g26047 2.0kb upstream 2.0kb upstream 2000 false Bd5: 27345574-27347573 Brachypodium distachyon
Bradi5g26047 2.0kb downstream 2.0kb downstream 7035 true Bd5: 27338539-27345573 Brachypodium distachyon
Bradi5g26047 2.0kb downstream 2.0kb downstream 2000 false Bd5: 27338539-27340538 Brachypodium distachyon
Bradi5g26047 5.0kb upstream 5.0kb upstream 10035 true Bd5: 27340539-27350573 Brachypodium distachyon
Bradi5g26047 5.0kb upstream 5.0kb upstream 5000 false Bd5: 27345574-27350573 Brachypodium distachyon
Bradi5g26047 5.0kb downstream 5.0kb downstream 10035 true Bd5: 27335539-27345573 Brachypodium distachyon
Bradi5g26047 5.0kb downstream 5.0kb downstream 5000 false Bd5: 27335539-27340538 Brachypodium distachyon
Bradi5g26047 10.0kb upstream 10.0kb upstream 15035 true Bd5: 27340539-27355573 Brachypodium distachyon
Bradi5g26047 10.0kb upstream 10.0kb upstream 10000 false Bd5: 27345574-27355573 Brachypodium distachyon
Bradi5g26047 10.0kb downstream 10.0kb downstream 15035 true Bd5: 27330539-27345573 Brachypodium distachyon
Bradi5g26047 10.0kb downstream 10.0kb downstream 10000 false Bd5: 27330539-27340538 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581901 5269 Grass View MSA
122051144 5273 Angiosperm View MSA
121351206 5274 Embryophyte View MSA
123426631 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.34        
cufflinks 7.534       High
cufflinks 7.293       High
cufflinks 6.962        
cufflinks 3.271        
cufflinks 5.32        
cufflinks 4.91        
cufflinks 6.969        
cufflinks 5.589        
cufflinks 5.45        
cufflinks 3.205        
cufflinks 6.57        
cufflinks 2.522       Low
cufflinks 2.256       Low
cufflinks 4.559        
cufflinks 5.798        
cufflinks 4.162        
cufflinks 5.05        
cufflinks 3.05        
cufflinks 2.456       Low
cufflinks 3.059        
cufflinks 8.479       High
cufflinks 6.58        
cufflinks 4.989        
cufflinks 4.575        
cufflinks 6.932        
cufflinks 2.286       Low
cufflinks 6.627        
cufflinks 8.092       High
cufflinks 6.358        

0 Strain