Gene : Bradi1g37390 B. distachyon v3.1
Defline:  (1 of 1) PTHR10108//PTHR10108:SF791 - METHYLTRANSFERASE // (S)-COCLAURINE-N-METHYLTRANSFERASE-RELATED Genomic Order:  4774
Name:  ? Bradi1g37390 Secondary Identifier:  ? PAC:32804788
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g37390 0.5kb upstream 0.5kb upstream 10094 true Bd1: 33383627-33393720 Brachypodium distachyon
Bradi1g37390 0.5kb upstream 0.5kb upstream 500 false Bd1: 33393221-33393720 Brachypodium distachyon
Bradi1g37390 0.5kb downstream 0.5kb downstream 10094 true Bd1: 33383127-33393220 Brachypodium distachyon
Bradi1g37390 0.5kb downstream 0.5kb downstream 500 false Bd1: 33383127-33383626 Brachypodium distachyon
Bradi1g37390 1.0kb upstream 1.0kb upstream 10594 true Bd1: 33383627-33394220 Brachypodium distachyon
Bradi1g37390 1.0kb upstream 1.0kb upstream 1000 false Bd1: 33393221-33394220 Brachypodium distachyon
Bradi1g37390 1.0kb downstream 1.0kb downstream 10594 true Bd1: 33382627-33393220 Brachypodium distachyon
Bradi1g37390 1.0kb downstream 1.0kb downstream 1000 false Bd1: 33382627-33383626 Brachypodium distachyon
Bradi1g37390 2.0kb upstream 2.0kb upstream 11594 true Bd1: 33383627-33395220 Brachypodium distachyon
Bradi1g37390 2.0kb upstream 2.0kb upstream 2000 false Bd1: 33393221-33395220 Brachypodium distachyon
Bradi1g37390 2.0kb downstream 2.0kb downstream 11594 true Bd1: 33381627-33393220 Brachypodium distachyon
Bradi1g37390 2.0kb downstream 2.0kb downstream 2000 false Bd1: 33381627-33383626 Brachypodium distachyon
Bradi1g37390 5.0kb upstream 5.0kb upstream 14594 true Bd1: 33383627-33398220 Brachypodium distachyon
Bradi1g37390 5.0kb upstream 5.0kb upstream 5000 false Bd1: 33393221-33398220 Brachypodium distachyon
Bradi1g37390 5.0kb downstream 5.0kb downstream 14594 true Bd1: 33378627-33393220 Brachypodium distachyon
Bradi1g37390 5.0kb downstream 5.0kb downstream 5000 false Bd1: 33378627-33383626 Brachypodium distachyon
Bradi1g37390 10.0kb upstream 10.0kb upstream 19594 true Bd1: 33383627-33403220 Brachypodium distachyon
Bradi1g37390 10.0kb upstream 10.0kb upstream 10000 false Bd1: 33393221-33403220 Brachypodium distachyon
Bradi1g37390 10.0kb downstream 10.0kb downstream 19594 true Bd1: 33373627-33393220 Brachypodium distachyon
Bradi1g37390 10.0kb downstream 10.0kb downstream 10000 false Bd1: 33373627-33383626 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573307 5269 Grass View MSA
122044798 5273 Angiosperm View MSA
121344638 5274 Embryophyte View MSA
123426651 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.229     High  
cufflinks 9.2        
cufflinks 10.495     High  
cufflinks 9.653        
cufflinks 7.651        
cufflinks 8.008        
cufflinks 7.843        
cufflinks 11.082     High  
cufflinks 8.096        
cufflinks 14.557     High High
cufflinks 6.115        
cufflinks 8.717        
cufflinks 6.638        
cufflinks 5.036       Low
cufflinks 7.809        
cufflinks 8.706        
cufflinks 9.515        
cufflinks 2.836       Low
cufflinks 10.453        
cufflinks 7.203        
cufflinks 9.723        
cufflinks 15.271     High High
cufflinks 11.845     High  
cufflinks 9.048        
cufflinks 8.991        
cufflinks 14.076     High High
cufflinks 5.061       Low
cufflinks 12.626     High High
cufflinks 13.369     High High
cufflinks 10.29        

0 Strain