Gene : Bradi5g25650 B. distachyon v3.1
Defline:  (1 of 1) PTHR12419:SF7 - OTU DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  3050
Name:  ? Bradi5g25650 Secondary Identifier:  ? PAC:32811799
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g25650 0.5kb upstream 0.5kb upstream 5119 true Bd5: 27045234-27050352 Brachypodium distachyon
Bradi5g25650 0.5kb upstream 0.5kb upstream 500 false Bd5: 27049853-27050352 Brachypodium distachyon
Bradi5g25650 0.5kb downstream 0.5kb downstream 5119 true Bd5: 27044734-27049852 Brachypodium distachyon
Bradi5g25650 0.5kb downstream 0.5kb downstream 500 false Bd5: 27044734-27045233 Brachypodium distachyon
Bradi5g25650 1.0kb upstream 1.0kb upstream 5619 true Bd5: 27045234-27050852 Brachypodium distachyon
Bradi5g25650 1.0kb upstream 1.0kb upstream 1000 false Bd5: 27049853-27050852 Brachypodium distachyon
Bradi5g25650 1.0kb downstream 1.0kb downstream 5619 true Bd5: 27044234-27049852 Brachypodium distachyon
Bradi5g25650 1.0kb downstream 1.0kb downstream 1000 false Bd5: 27044234-27045233 Brachypodium distachyon
Bradi5g25650 2.0kb upstream 2.0kb upstream 6619 true Bd5: 27045234-27051852 Brachypodium distachyon
Bradi5g25650 2.0kb upstream 2.0kb upstream 2000 false Bd5: 27049853-27051852 Brachypodium distachyon
Bradi5g25650 2.0kb downstream 2.0kb downstream 6619 true Bd5: 27043234-27049852 Brachypodium distachyon
Bradi5g25650 2.0kb downstream 2.0kb downstream 2000 false Bd5: 27043234-27045233 Brachypodium distachyon
Bradi5g25650 5.0kb upstream 5.0kb upstream 9619 true Bd5: 27045234-27054852 Brachypodium distachyon
Bradi5g25650 5.0kb upstream 5.0kb upstream 5000 false Bd5: 27049853-27054852 Brachypodium distachyon
Bradi5g25650 5.0kb downstream 5.0kb downstream 9619 true Bd5: 27040234-27049852 Brachypodium distachyon
Bradi5g25650 5.0kb downstream 5.0kb downstream 5000 false Bd5: 27040234-27045233 Brachypodium distachyon
Bradi5g25650 10.0kb upstream 10.0kb upstream 14619 true Bd5: 27045234-27059852 Brachypodium distachyon
Bradi5g25650 10.0kb upstream 10.0kb upstream 10000 false Bd5: 27049853-27059852 Brachypodium distachyon
Bradi5g25650 10.0kb downstream 10.0kb downstream 14619 true Bd5: 27035234-27049852 Brachypodium distachyon
Bradi5g25650 10.0kb downstream 10.0kb downstream 10000 false Bd5: 27035234-27045233 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574660 5269 Grass View MSA
122041608 5273 Angiosperm View MSA
121347051 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.15       Low
cufflinks 0.248        
cufflinks 0.262        
cufflinks 0.248        
cufflinks 0.141       Low
cufflinks 0.212        
cufflinks 0.204        
cufflinks 0.19        
cufflinks 0.233        
cufflinks 0.267        
cufflinks 0.229        
cufflinks 0.191        
cufflinks 0.143       Low
cufflinks 0.18        
cufflinks 0.163        
cufflinks 0.198        
cufflinks 0.189        
cufflinks 0.221        
cufflinks 0.359       High
cufflinks 0.157       Low
cufflinks 0.231        
cufflinks 0.249        
cufflinks 0.202        
cufflinks 0.184        
cufflinks 0.225        
cufflinks 0.27        
cufflinks 0.183        
cufflinks 0.295        
cufflinks 0.311       High
cufflinks 0.19        

0 Strain