Gene : Bradi5g25960 B. distachyon v3.1
Defline:  (1 of 2) K03022 - DNA-directed RNA polymerase III subunit RPC8 (RPC8, POLR3H) Genomic Order:  3087
Name:  ? Bradi5g25960 Secondary Identifier:  ? PAC:32809655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g25960 0.5kb upstream 0.5kb upstream 3005 true Bd5: 27279210-27282214 Brachypodium distachyon
Bradi5g25960 0.5kb upstream 0.5kb upstream 500 false Bd5: 27279210-27279709 Brachypodium distachyon
Bradi5g25960 0.5kb downstream 0.5kb downstream 3005 true Bd5: 27279710-27282714 Brachypodium distachyon
Bradi5g25960 0.5kb downstream 0.5kb downstream 500 false Bd5: 27282215-27282714 Brachypodium distachyon
Bradi5g25960 1.0kb upstream 1.0kb upstream 3505 true Bd5: 27278710-27282214 Brachypodium distachyon
Bradi5g25960 1.0kb upstream 1.0kb upstream 1000 false Bd5: 27278710-27279709 Brachypodium distachyon
Bradi5g25960 1.0kb downstream 1.0kb downstream 3505 true Bd5: 27279710-27283214 Brachypodium distachyon
Bradi5g25960 1.0kb downstream 1.0kb downstream 1000 false Bd5: 27282215-27283214 Brachypodium distachyon
Bradi5g25960 2.0kb upstream 2.0kb upstream 4505 true Bd5: 27277710-27282214 Brachypodium distachyon
Bradi5g25960 2.0kb upstream 2.0kb upstream 2000 false Bd5: 27277710-27279709 Brachypodium distachyon
Bradi5g25960 2.0kb downstream 2.0kb downstream 4505 true Bd5: 27279710-27284214 Brachypodium distachyon
Bradi5g25960 2.0kb downstream 2.0kb downstream 2000 false Bd5: 27282215-27284214 Brachypodium distachyon
Bradi5g25960 5.0kb upstream 5.0kb upstream 7505 true Bd5: 27274710-27282214 Brachypodium distachyon
Bradi5g25960 5.0kb upstream 5.0kb upstream 5000 false Bd5: 27274710-27279709 Brachypodium distachyon
Bradi5g25960 5.0kb downstream 5.0kb downstream 7505 true Bd5: 27279710-27287214 Brachypodium distachyon
Bradi5g25960 5.0kb downstream 5.0kb downstream 5000 false Bd5: 27282215-27287214 Brachypodium distachyon
Bradi5g25960 10.0kb upstream 10.0kb upstream 12505 true Bd5: 27269710-27282214 Brachypodium distachyon
Bradi5g25960 10.0kb upstream 10.0kb upstream 10000 false Bd5: 27269710-27279709 Brachypodium distachyon
Bradi5g25960 10.0kb downstream 10.0kb downstream 12505 true Bd5: 27279710-27292214 Brachypodium distachyon
Bradi5g25960 10.0kb downstream 10.0kb downstream 10000 false Bd5: 27282215-27292214 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026323 5273 Angiosperm View MSA
124573422 5269 Grass View MSA
121347367 5274 Embryophyte View MSA
123423953 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.042        
cufflinks 3.389        
cufflinks 4.171        
cufflinks 4.636        
cufflinks 2.269       Low
cufflinks 2.975        
cufflinks 3.369        
cufflinks 3.068        
cufflinks 2.988        
cufflinks 5.082       High
cufflinks 2.59        
cufflinks 2.68        
cufflinks 1.875       Low
cufflinks 2.373       Low
cufflinks 2.272       Low
cufflinks 3.015        
cufflinks 6.679       High
cufflinks 3.009        
cufflinks 4.219        
cufflinks 2.535        
cufflinks 5.104       High
cufflinks 3.803        
cufflinks 3.327        
cufflinks 2.907        
cufflinks 3.64        
cufflinks 4.863       High
cufflinks 2.141       Low
cufflinks 4.687        
cufflinks 4.073        
cufflinks 3.954        

0 Strain