Gene : Bradi1g37790 B. distachyon v3.1
Defline:  (1 of 2) K09497 - T-complex protein 1 subunit epsilon (CCT5) Genomic Order:  4837
Name:  ? Bradi1g37790 Secondary Identifier:  ? PAC:32797873
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g37790 0.5kb upstream 0.5kb upstream 6471 true Bd1: 33867682-33874152 Brachypodium distachyon
Bradi1g37790 0.5kb upstream 0.5kb upstream 500 false Bd1: 33873653-33874152 Brachypodium distachyon
Bradi1g37790 0.5kb downstream 0.5kb downstream 6471 true Bd1: 33867182-33873652 Brachypodium distachyon
Bradi1g37790 0.5kb downstream 0.5kb downstream 500 false Bd1: 33867182-33867681 Brachypodium distachyon
Bradi1g37790 1.0kb upstream 1.0kb upstream 6971 true Bd1: 33867682-33874652 Brachypodium distachyon
Bradi1g37790 1.0kb upstream 1.0kb upstream 1000 false Bd1: 33873653-33874652 Brachypodium distachyon
Bradi1g37790 1.0kb downstream 1.0kb downstream 6971 true Bd1: 33866682-33873652 Brachypodium distachyon
Bradi1g37790 1.0kb downstream 1.0kb downstream 1000 false Bd1: 33866682-33867681 Brachypodium distachyon
Bradi1g37790 2.0kb upstream 2.0kb upstream 7971 true Bd1: 33867682-33875652 Brachypodium distachyon
Bradi1g37790 2.0kb upstream 2.0kb upstream 2000 false Bd1: 33873653-33875652 Brachypodium distachyon
Bradi1g37790 2.0kb downstream 2.0kb downstream 7971 true Bd1: 33865682-33873652 Brachypodium distachyon
Bradi1g37790 2.0kb downstream 2.0kb downstream 2000 false Bd1: 33865682-33867681 Brachypodium distachyon
Bradi1g37790 5.0kb upstream 5.0kb upstream 10971 true Bd1: 33867682-33878652 Brachypodium distachyon
Bradi1g37790 5.0kb upstream 5.0kb upstream 5000 false Bd1: 33873653-33878652 Brachypodium distachyon
Bradi1g37790 5.0kb downstream 5.0kb downstream 10971 true Bd1: 33862682-33873652 Brachypodium distachyon
Bradi1g37790 5.0kb downstream 5.0kb downstream 5000 false Bd1: 33862682-33867681 Brachypodium distachyon
Bradi1g37790 10.0kb upstream 10.0kb upstream 15971 true Bd1: 33867682-33883652 Brachypodium distachyon
Bradi1g37790 10.0kb upstream 10.0kb upstream 10000 false Bd1: 33873653-33883652 Brachypodium distachyon
Bradi1g37790 10.0kb downstream 10.0kb downstream 15971 true Bd1: 33857682-33873652 Brachypodium distachyon
Bradi1g37790 10.0kb downstream 10.0kb downstream 10000 false Bd1: 33857682-33867681 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582588 5269 Grass View MSA
122043511 5273 Angiosperm View MSA
121350582 5274 Embryophyte View MSA
123425092 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.254     High  
cufflinks 30.519     High  
cufflinks 31.399     High  
cufflinks 24.609     High  
cufflinks 16.194     High  
cufflinks 27.458     High  
cufflinks 28.073     High  
cufflinks 20.186     High  
cufflinks 24.014     High  
cufflinks 18.518     High  
cufflinks 13.372     High Low
cufflinks 25.66     High  
cufflinks 9.484     High Low
cufflinks 10.253     High Low
cufflinks 12.772     High Low
cufflinks 32.132     High  
cufflinks 23.21     High  
cufflinks 61.749     High High
cufflinks 24.253     High  
cufflinks 14.7     High  
cufflinks 29.969     High  
cufflinks 24.6     High  
cufflinks 18.321     High  
cufflinks 20.858     High  
cufflinks 23.749     High  
cufflinks 26.188     High  
cufflinks 13.789     High  
cufflinks 22.659     High  
cufflinks 22.418     High  
cufflinks 39.995     High High

0 Strain