Gene : Bradi5g24850 B. distachyon v3.1
Defline:  (1 of 1) PTHR31682//PTHR31682:SF4 - FAMILY NOT NAMED // UDP-ARABINOPYRANOSE MUTASE 5-RELATED Genomic Order:  2950
Name:  ? Bradi5g24850 Secondary Identifier:  ? PAC:32807455
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g24850 0.5kb upstream 0.5kb upstream 1875 true Bd5: 26555892-26557766 Brachypodium distachyon
Bradi5g24850 0.5kb upstream 0.5kb upstream 500 false Bd5: 26555892-26556391 Brachypodium distachyon
Bradi5g24850 0.5kb downstream 0.5kb downstream 1875 true Bd5: 26556392-26558266 Brachypodium distachyon
Bradi5g24850 0.5kb downstream 0.5kb downstream 500 false Bd5: 26557767-26558266 Brachypodium distachyon
Bradi5g24850 1.0kb upstream 1.0kb upstream 2375 true Bd5: 26555392-26557766 Brachypodium distachyon
Bradi5g24850 1.0kb upstream 1.0kb upstream 1000 false Bd5: 26555392-26556391 Brachypodium distachyon
Bradi5g24850 1.0kb downstream 1.0kb downstream 2375 true Bd5: 26556392-26558766 Brachypodium distachyon
Bradi5g24850 1.0kb downstream 1.0kb downstream 1000 false Bd5: 26557767-26558766 Brachypodium distachyon
Bradi5g24850 2.0kb upstream 2.0kb upstream 3375 true Bd5: 26554392-26557766 Brachypodium distachyon
Bradi5g24850 2.0kb upstream 2.0kb upstream 2000 false Bd5: 26554392-26556391 Brachypodium distachyon
Bradi5g24850 2.0kb downstream 2.0kb downstream 3375 true Bd5: 26556392-26559766 Brachypodium distachyon
Bradi5g24850 2.0kb downstream 2.0kb downstream 2000 false Bd5: 26557767-26559766 Brachypodium distachyon
Bradi5g24850 5.0kb upstream 5.0kb upstream 6375 true Bd5: 26551392-26557766 Brachypodium distachyon
Bradi5g24850 5.0kb upstream 5.0kb upstream 5000 false Bd5: 26551392-26556391 Brachypodium distachyon
Bradi5g24850 5.0kb downstream 5.0kb downstream 6375 true Bd5: 26556392-26562766 Brachypodium distachyon
Bradi5g24850 5.0kb downstream 5.0kb downstream 5000 false Bd5: 26557767-26562766 Brachypodium distachyon
Bradi5g24850 10.0kb upstream 10.0kb upstream 11375 true Bd5: 26546392-26557766 Brachypodium distachyon
Bradi5g24850 10.0kb upstream 10.0kb upstream 10000 false Bd5: 26546392-26556391 Brachypodium distachyon
Bradi5g24850 10.0kb downstream 10.0kb downstream 11375 true Bd5: 26556392-26567766 Brachypodium distachyon
Bradi5g24850 10.0kb downstream 10.0kb downstream 10000 false Bd5: 26557767-26567766 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573603 5269 Grass View MSA
122046007 5273 Angiosperm View MSA
121310537 5274 Embryophyte View MSA
123347996 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 96.899     High  
cufflinks 77.475     High  
cufflinks 80.801     High  
cufflinks 73.928     High  
cufflinks 181.522     High High
cufflinks 78.973     High  
cufflinks 77.921     High  
cufflinks 80.661     High  
cufflinks 77.485     High  
cufflinks 77.978     High  
cufflinks 39.207     High Low
cufflinks 78.597     High  
cufflinks 35.77     High Low
cufflinks 36.5     High Low
cufflinks 74.246     High  
cufflinks 88.117     High  
cufflinks 106.125     High  
cufflinks 183.854     High High
cufflinks 134.584     High High
cufflinks 125.505     High  
cufflinks 162.176     High High
cufflinks 85.303     High  
cufflinks 77.071     High  
cufflinks 82.766     High  
cufflinks 74.81     High  
cufflinks 79.663     High  
cufflinks 47.744     High Low
cufflinks 78.404     High  
cufflinks 85.699     High  
cufflinks 136.98     High High

0 Strain