Gene : Bradi5g25291 B. distachyon v3.1
Defline:  (1 of 3) PF09133 - SANTA (SANT Associated) (SANTA) Genomic Order:  3007
Name:  ? Bradi5g25291 Secondary Identifier:  ? PAC:32807145
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g25291 0.5kb upstream 0.5kb upstream 6292 true Bd5: 26850635-26856926 Brachypodium distachyon
Bradi5g25291 0.5kb upstream 0.5kb upstream 500 false Bd5: 26850635-26851134 Brachypodium distachyon
Bradi5g25291 0.5kb downstream 0.5kb downstream 6292 true Bd5: 26851135-26857426 Brachypodium distachyon
Bradi5g25291 0.5kb downstream 0.5kb downstream 500 false Bd5: 26856927-26857426 Brachypodium distachyon
Bradi5g25291 1.0kb upstream 1.0kb upstream 6792 true Bd5: 26850135-26856926 Brachypodium distachyon
Bradi5g25291 1.0kb upstream 1.0kb upstream 1000 false Bd5: 26850135-26851134 Brachypodium distachyon
Bradi5g25291 1.0kb downstream 1.0kb downstream 6792 true Bd5: 26851135-26857926 Brachypodium distachyon
Bradi5g25291 1.0kb downstream 1.0kb downstream 1000 false Bd5: 26856927-26857926 Brachypodium distachyon
Bradi5g25291 2.0kb upstream 2.0kb upstream 7792 true Bd5: 26849135-26856926 Brachypodium distachyon
Bradi5g25291 2.0kb upstream 2.0kb upstream 2000 false Bd5: 26849135-26851134 Brachypodium distachyon
Bradi5g25291 2.0kb downstream 2.0kb downstream 7792 true Bd5: 26851135-26858926 Brachypodium distachyon
Bradi5g25291 2.0kb downstream 2.0kb downstream 2000 false Bd5: 26856927-26858926 Brachypodium distachyon
Bradi5g25291 5.0kb upstream 5.0kb upstream 10792 true Bd5: 26846135-26856926 Brachypodium distachyon
Bradi5g25291 5.0kb upstream 5.0kb upstream 5000 false Bd5: 26846135-26851134 Brachypodium distachyon
Bradi5g25291 5.0kb downstream 5.0kb downstream 10792 true Bd5: 26851135-26861926 Brachypodium distachyon
Bradi5g25291 5.0kb downstream 5.0kb downstream 5000 false Bd5: 26856927-26861926 Brachypodium distachyon
Bradi5g25291 10.0kb upstream 10.0kb upstream 15792 true Bd5: 26841135-26856926 Brachypodium distachyon
Bradi5g25291 10.0kb upstream 10.0kb upstream 10000 false Bd5: 26841135-26851134 Brachypodium distachyon
Bradi5g25291 10.0kb downstream 10.0kb downstream 15792 true Bd5: 26851135-26866926 Brachypodium distachyon
Bradi5g25291 10.0kb downstream 10.0kb downstream 10000 false Bd5: 26856927-26866926 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589259 5269 Grass View MSA
122043476 5273 Angiosperm View MSA
121351771 5274 Embryophyte View MSA
123382314 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.275       Low
cufflinks 0.749        
cufflinks 0.738        
cufflinks 0.718        
cufflinks 0.28        
cufflinks 0.662        
cufflinks 0.669        
cufflinks 0.506        
cufflinks 0.668        
cufflinks 0.444        
cufflinks 0.508        
cufflinks 0.515        
cufflinks 0.251       Low
cufflinks 0.347        
cufflinks 0.228       Low
cufflinks 0.707        
cufflinks 0.711        
cufflinks 0.863       High
cufflinks 0.665        
cufflinks 0.151       Low
cufflinks 0.559        
cufflinks 0.71        
cufflinks 0.515        
cufflinks 0.561        
cufflinks 0.673        
cufflinks 0.812        
cufflinks 0.293        
cufflinks 0.623        
cufflinks 0.705        
cufflinks 0.631        

0 Strain