Gene : Bradi5g25300 B. distachyon v3.1
Defline:  (1 of 1) PTHR30314//PTHR30314:SF12 - CELL DIVISION PROTEIN FTSZ-RELATED // CELL DIVISION PROTEIN FTSZ HOMOLOG 1, CHLOROPLASTIC Genomic Order:  3008
Name:  ? Bradi5g25300 Secondary Identifier:  ? PAC:32808061
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g25300 0.5kb upstream 0.5kb upstream 3689 true Bd5: 26857138-26860826 Brachypodium distachyon
Bradi5g25300 0.5kb upstream 0.5kb upstream 500 false Bd5: 26860327-26860826 Brachypodium distachyon
Bradi5g25300 0.5kb downstream 0.5kb downstream 3689 true Bd5: 26856638-26860326 Brachypodium distachyon
Bradi5g25300 0.5kb downstream 0.5kb downstream 500 false Bd5: 26856638-26857137 Brachypodium distachyon
Bradi5g25300 1.0kb upstream 1.0kb upstream 4189 true Bd5: 26857138-26861326 Brachypodium distachyon
Bradi5g25300 1.0kb upstream 1.0kb upstream 1000 false Bd5: 26860327-26861326 Brachypodium distachyon
Bradi5g25300 1.0kb downstream 1.0kb downstream 4189 true Bd5: 26856138-26860326 Brachypodium distachyon
Bradi5g25300 1.0kb downstream 1.0kb downstream 1000 false Bd5: 26856138-26857137 Brachypodium distachyon
Bradi5g25300 2.0kb upstream 2.0kb upstream 5189 true Bd5: 26857138-26862326 Brachypodium distachyon
Bradi5g25300 2.0kb upstream 2.0kb upstream 2000 false Bd5: 26860327-26862326 Brachypodium distachyon
Bradi5g25300 2.0kb downstream 2.0kb downstream 5189 true Bd5: 26855138-26860326 Brachypodium distachyon
Bradi5g25300 2.0kb downstream 2.0kb downstream 2000 false Bd5: 26855138-26857137 Brachypodium distachyon
Bradi5g25300 5.0kb upstream 5.0kb upstream 8189 true Bd5: 26857138-26865326 Brachypodium distachyon
Bradi5g25300 5.0kb upstream 5.0kb upstream 5000 false Bd5: 26860327-26865326 Brachypodium distachyon
Bradi5g25300 5.0kb downstream 5.0kb downstream 8189 true Bd5: 26852138-26860326 Brachypodium distachyon
Bradi5g25300 5.0kb downstream 5.0kb downstream 5000 false Bd5: 26852138-26857137 Brachypodium distachyon
Bradi5g25300 10.0kb upstream 10.0kb upstream 13189 true Bd5: 26857138-26870326 Brachypodium distachyon
Bradi5g25300 10.0kb upstream 10.0kb upstream 10000 false Bd5: 26860327-26870326 Brachypodium distachyon
Bradi5g25300 10.0kb downstream 10.0kb downstream 13189 true Bd5: 26847138-26860326 Brachypodium distachyon
Bradi5g25300 10.0kb downstream 10.0kb downstream 10000 false Bd5: 26847138-26857137 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579885 5269 Grass View MSA
122045979 5273 Angiosperm View MSA
123428991 5275 Viridiplantae View MSA
121350401 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.807     High  
cufflinks 19.192     High  
cufflinks 16.469     High  
cufflinks 16.935     High  
cufflinks 10.406     High  
cufflinks 15.013     High  
cufflinks 17.056     High  
cufflinks 13.432     High  
cufflinks 11.753     High  
cufflinks 10.039        
cufflinks 3.076       Low
cufflinks 12.231     High  
cufflinks 1.473       Low
cufflinks 1.792       Low
cufflinks 3.91       Low
cufflinks 16.881     High  
cufflinks 17.487     High  
cufflinks 11.254        
cufflinks 17.338     High  
cufflinks 1.443       Low
cufflinks 10.508        
cufflinks 13.806     High  
cufflinks 10.047     High  
cufflinks 10.607     High  
cufflinks 13.498     High  
cufflinks 15.112     High  
cufflinks 1.645       Low
cufflinks 12.011     High  
cufflinks 12.759     High  
cufflinks 15.065     High  

0 Strain