Gene : Bradi5g24790 B. distachyon v3.1
Defline:  (1 of 85) K10523 - speckle-type POZ protein (SPOP) Genomic Order:  2940
Name:  ? Bradi5g24790 Secondary Identifier:  ? PAC:32809689
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g24790 0.5kb upstream 0.5kb upstream 2180 true Bd5: 26507470-26509649 Brachypodium distachyon
Bradi5g24790 0.5kb upstream 0.5kb upstream 500 false Bd5: 26507470-26507969 Brachypodium distachyon
Bradi5g24790 0.5kb downstream 0.5kb downstream 2180 true Bd5: 26507970-26510149 Brachypodium distachyon
Bradi5g24790 0.5kb downstream 0.5kb downstream 500 false Bd5: 26509650-26510149 Brachypodium distachyon
Bradi5g24790 1.0kb upstream 1.0kb upstream 2680 true Bd5: 26506970-26509649 Brachypodium distachyon
Bradi5g24790 1.0kb upstream 1.0kb upstream 1000 false Bd5: 26506970-26507969 Brachypodium distachyon
Bradi5g24790 1.0kb downstream 1.0kb downstream 2680 true Bd5: 26507970-26510649 Brachypodium distachyon
Bradi5g24790 1.0kb downstream 1.0kb downstream 1000 false Bd5: 26509650-26510649 Brachypodium distachyon
Bradi5g24790 2.0kb upstream 2.0kb upstream 3680 true Bd5: 26505970-26509649 Brachypodium distachyon
Bradi5g24790 2.0kb upstream 2.0kb upstream 2000 false Bd5: 26505970-26507969 Brachypodium distachyon
Bradi5g24790 2.0kb downstream 2.0kb downstream 3680 true Bd5: 26507970-26511649 Brachypodium distachyon
Bradi5g24790 2.0kb downstream 2.0kb downstream 2000 false Bd5: 26509650-26511649 Brachypodium distachyon
Bradi5g24790 5.0kb upstream 5.0kb upstream 6680 true Bd5: 26502970-26509649 Brachypodium distachyon
Bradi5g24790 5.0kb upstream 5.0kb upstream 5000 false Bd5: 26502970-26507969 Brachypodium distachyon
Bradi5g24790 5.0kb downstream 5.0kb downstream 6680 true Bd5: 26507970-26514649 Brachypodium distachyon
Bradi5g24790 5.0kb downstream 5.0kb downstream 5000 false Bd5: 26509650-26514649 Brachypodium distachyon
Bradi5g24790 10.0kb upstream 10.0kb upstream 11680 true Bd5: 26497970-26509649 Brachypodium distachyon
Bradi5g24790 10.0kb upstream 10.0kb upstream 10000 false Bd5: 26497970-26507969 Brachypodium distachyon
Bradi5g24790 10.0kb downstream 10.0kb downstream 11680 true Bd5: 26507970-26519649 Brachypodium distachyon
Bradi5g24790 10.0kb downstream 10.0kb downstream 10000 false Bd5: 26509650-26519649 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121992969 5273 Angiosperm View MSA
124573711 5269 Grass View MSA
121263287 5274 Embryophyte View MSA
123301862 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.064     Low High
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain