Gene : Bradi1g38666 B. distachyon v3.1
Defline:  (1 of 56) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  4935
Name:  ? Bradi1g38666 Secondary Identifier:  ? PAC:32794833
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g38666 0.5kb upstream 0.5kb upstream 4315 true Bd1: 35058840-35063154 Brachypodium distachyon
Bradi1g38666 0.5kb upstream 0.5kb upstream 500 false Bd1: 35062655-35063154 Brachypodium distachyon
Bradi1g38666 0.5kb downstream 0.5kb downstream 4315 true Bd1: 35058340-35062654 Brachypodium distachyon
Bradi1g38666 0.5kb downstream 0.5kb downstream 500 false Bd1: 35058340-35058839 Brachypodium distachyon
Bradi1g38666 1.0kb upstream 1.0kb upstream 4815 true Bd1: 35058840-35063654 Brachypodium distachyon
Bradi1g38666 1.0kb upstream 1.0kb upstream 1000 false Bd1: 35062655-35063654 Brachypodium distachyon
Bradi1g38666 1.0kb downstream 1.0kb downstream 4815 true Bd1: 35057840-35062654 Brachypodium distachyon
Bradi1g38666 1.0kb downstream 1.0kb downstream 1000 false Bd1: 35057840-35058839 Brachypodium distachyon
Bradi1g38666 2.0kb upstream 2.0kb upstream 5815 true Bd1: 35058840-35064654 Brachypodium distachyon
Bradi1g38666 2.0kb upstream 2.0kb upstream 2000 false Bd1: 35062655-35064654 Brachypodium distachyon
Bradi1g38666 2.0kb downstream 2.0kb downstream 5815 true Bd1: 35056840-35062654 Brachypodium distachyon
Bradi1g38666 2.0kb downstream 2.0kb downstream 2000 false Bd1: 35056840-35058839 Brachypodium distachyon
Bradi1g38666 5.0kb upstream 5.0kb upstream 8815 true Bd1: 35058840-35067654 Brachypodium distachyon
Bradi1g38666 5.0kb upstream 5.0kb upstream 5000 false Bd1: 35062655-35067654 Brachypodium distachyon
Bradi1g38666 5.0kb downstream 5.0kb downstream 8815 true Bd1: 35053840-35062654 Brachypodium distachyon
Bradi1g38666 5.0kb downstream 5.0kb downstream 5000 false Bd1: 35053840-35058839 Brachypodium distachyon
Bradi1g38666 10.0kb upstream 10.0kb upstream 13815 true Bd1: 35058840-35072654 Brachypodium distachyon
Bradi1g38666 10.0kb upstream 10.0kb upstream 10000 false Bd1: 35062655-35072654 Brachypodium distachyon
Bradi1g38666 10.0kb downstream 10.0kb downstream 13815 true Bd1: 35048840-35062654 Brachypodium distachyon
Bradi1g38666 10.0kb downstream 10.0kb downstream 10000 false Bd1: 35048840-35058839 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031606 5273 Angiosperm View MSA
124589040 5269 Grass View MSA
121300621 5274 Embryophyte View MSA
123338368 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain