Gene : Bradi5g24387 B. distachyon v3.1
Defline:  (1 of 6) KOG1397 - Ca2+/H+ antiporter VCX1 and related proteins Genomic Order:  2887
Name:  ? Bradi5g24387 Secondary Identifier:  ? PAC:32808941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g24387 0.5kb upstream 0.5kb upstream 6040 true Bd5: 26226207-26232246 Brachypodium distachyon
Bradi5g24387 0.5kb upstream 0.5kb upstream 500 false Bd5: 26231747-26232246 Brachypodium distachyon
Bradi5g24387 0.5kb downstream 0.5kb downstream 6040 true Bd5: 26225707-26231746 Brachypodium distachyon
Bradi5g24387 0.5kb downstream 0.5kb downstream 500 false Bd5: 26225707-26226206 Brachypodium distachyon
Bradi5g24387 1.0kb upstream 1.0kb upstream 6540 true Bd5: 26226207-26232746 Brachypodium distachyon
Bradi5g24387 1.0kb upstream 1.0kb upstream 1000 false Bd5: 26231747-26232746 Brachypodium distachyon
Bradi5g24387 1.0kb downstream 1.0kb downstream 6540 true Bd5: 26225207-26231746 Brachypodium distachyon
Bradi5g24387 1.0kb downstream 1.0kb downstream 1000 false Bd5: 26225207-26226206 Brachypodium distachyon
Bradi5g24387 2.0kb upstream 2.0kb upstream 7540 true Bd5: 26226207-26233746 Brachypodium distachyon
Bradi5g24387 2.0kb upstream 2.0kb upstream 2000 false Bd5: 26231747-26233746 Brachypodium distachyon
Bradi5g24387 2.0kb downstream 2.0kb downstream 7540 true Bd5: 26224207-26231746 Brachypodium distachyon
Bradi5g24387 2.0kb downstream 2.0kb downstream 2000 false Bd5: 26224207-26226206 Brachypodium distachyon
Bradi5g24387 5.0kb upstream 5.0kb upstream 10540 true Bd5: 26226207-26236746 Brachypodium distachyon
Bradi5g24387 5.0kb upstream 5.0kb upstream 5000 false Bd5: 26231747-26236746 Brachypodium distachyon
Bradi5g24387 5.0kb downstream 5.0kb downstream 10540 true Bd5: 26221207-26231746 Brachypodium distachyon
Bradi5g24387 5.0kb downstream 5.0kb downstream 5000 false Bd5: 26221207-26226206 Brachypodium distachyon
Bradi5g24387 10.0kb upstream 10.0kb upstream 15540 true Bd5: 26226207-26241746 Brachypodium distachyon
Bradi5g24387 10.0kb upstream 10.0kb upstream 10000 false Bd5: 26231747-26241746 Brachypodium distachyon
Bradi5g24387 10.0kb downstream 10.0kb downstream 15540 true Bd5: 26216207-26231746 Brachypodium distachyon
Bradi5g24387 10.0kb downstream 10.0kb downstream 10000 false Bd5: 26216207-26226206 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576428 5269 Grass View MSA
122045212 5273 Angiosperm View MSA
121347037 5274 Embryophyte View MSA
123427763 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.405        
cufflinks 5.656        
cufflinks 7.695        
cufflinks 5.308        
cufflinks 4.617        
cufflinks 5.613        
cufflinks 5.003        
cufflinks 4.719        
cufflinks 5.493        
cufflinks 6.089        
cufflinks 4.767        
cufflinks 5.076        
cufflinks 5.531        
cufflinks 3.347       Low
cufflinks 6.783        
cufflinks 4.992        
cufflinks 4.676        
cufflinks 13.008     High High
cufflinks 6.44        
cufflinks 2.958       Low
cufflinks 7.679        
cufflinks 7.263        
cufflinks 4.575        
cufflinks 4.771        
cufflinks 4.982        
cufflinks 8.264       High
cufflinks 5.383        
cufflinks 8.306       High
cufflinks 7.364        
cufflinks 8.681       High

0 Strain