Gene : Bradi1g38640 B. distachyon v3.1
Genomic Order:  4932 Name:  ? Bradi1g38640
Secondary Identifier:  ? PAC:32796780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g38640 0.5kb upstream 0.5kb upstream 1842 true Bd1: 34987118-34988959 Brachypodium distachyon
Bradi1g38640 0.5kb upstream 0.5kb upstream 500 false Bd1: 34988460-34988959 Brachypodium distachyon
Bradi1g38640 0.5kb downstream 0.5kb downstream 1842 true Bd1: 34986618-34988459 Brachypodium distachyon
Bradi1g38640 0.5kb downstream 0.5kb downstream 500 false Bd1: 34986618-34987117 Brachypodium distachyon
Bradi1g38640 1.0kb upstream 1.0kb upstream 2342 true Bd1: 34987118-34989459 Brachypodium distachyon
Bradi1g38640 1.0kb upstream 1.0kb upstream 1000 false Bd1: 34988460-34989459 Brachypodium distachyon
Bradi1g38640 1.0kb downstream 1.0kb downstream 2342 true Bd1: 34986118-34988459 Brachypodium distachyon
Bradi1g38640 1.0kb downstream 1.0kb downstream 1000 false Bd1: 34986118-34987117 Brachypodium distachyon
Bradi1g38640 2.0kb upstream 2.0kb upstream 3342 true Bd1: 34987118-34990459 Brachypodium distachyon
Bradi1g38640 2.0kb upstream 2.0kb upstream 2000 false Bd1: 34988460-34990459 Brachypodium distachyon
Bradi1g38640 2.0kb downstream 2.0kb downstream 3342 true Bd1: 34985118-34988459 Brachypodium distachyon
Bradi1g38640 2.0kb downstream 2.0kb downstream 2000 false Bd1: 34985118-34987117 Brachypodium distachyon
Bradi1g38640 5.0kb upstream 5.0kb upstream 6342 true Bd1: 34987118-34993459 Brachypodium distachyon
Bradi1g38640 5.0kb upstream 5.0kb upstream 5000 false Bd1: 34988460-34993459 Brachypodium distachyon
Bradi1g38640 5.0kb downstream 5.0kb downstream 6342 true Bd1: 34982118-34988459 Brachypodium distachyon
Bradi1g38640 5.0kb downstream 5.0kb downstream 5000 false Bd1: 34982118-34987117 Brachypodium distachyon
Bradi1g38640 10.0kb upstream 10.0kb upstream 11342 true Bd1: 34987118-34998459 Brachypodium distachyon
Bradi1g38640 10.0kb upstream 10.0kb upstream 10000 false Bd1: 34988460-34998459 Brachypodium distachyon
Bradi1g38640 10.0kb downstream 10.0kb downstream 11342 true Bd1: 34977118-34988459 Brachypodium distachyon
Bradi1g38640 10.0kb downstream 10.0kb downstream 10000 false Bd1: 34977118-34987117 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570838 5269 Grass View MSA
122042507 5273 Angiosperm View MSA
121309981 5274 Embryophyte View MSA
123347593 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.676        
cufflinks 0.1       Low
cufflinks 0.197        
cufflinks 0.103       Low
cufflinks 0.082     Low Low
cufflinks 0.159        
cufflinks 0.09       Low
cufflinks 0.177        
cufflinks 0.207        
cufflinks 0.79        
cufflinks 0.35        
cufflinks 0.094       Low
cufflinks 0.426        
cufflinks 0.306        
cufflinks 0.274        
cufflinks 0.101       Low
cufflinks 0.32        
cufflinks 3.627       High
cufflinks 0.099     Low Low
cufflinks 0.75        
cufflinks 0.983       High
cufflinks 0.229        
cufflinks 0.265        
cufflinks 0.184        
cufflinks 0.189        
cufflinks 0.364        
cufflinks 0.721        
cufflinks 0.882       High
cufflinks 0.483        
cufflinks 0.073     Low Low

0 Strain