Gene : Bradi1g38760 B. distachyon v3.1
Defline:  (1 of 1) PTHR11019//PTHR11019:SF102 - THIJ/PFPI // SUBFAMILY NOT NAMED Genomic Order:  4951
Name:  ? Bradi1g38760 Secondary Identifier:  ? PAC:32799251
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g38760 0.5kb upstream 0.5kb upstream 5353 true Bd1: 35318291-35323643 Brachypodium distachyon
Bradi1g38760 0.5kb upstream 0.5kb upstream 500 false Bd1: 35323144-35323643 Brachypodium distachyon
Bradi1g38760 0.5kb downstream 0.5kb downstream 5353 true Bd1: 35317791-35323143 Brachypodium distachyon
Bradi1g38760 0.5kb downstream 0.5kb downstream 500 false Bd1: 35317791-35318290 Brachypodium distachyon
Bradi1g38760 1.0kb upstream 1.0kb upstream 5853 true Bd1: 35318291-35324143 Brachypodium distachyon
Bradi1g38760 1.0kb upstream 1.0kb upstream 1000 false Bd1: 35323144-35324143 Brachypodium distachyon
Bradi1g38760 1.0kb downstream 1.0kb downstream 5853 true Bd1: 35317291-35323143 Brachypodium distachyon
Bradi1g38760 1.0kb downstream 1.0kb downstream 1000 false Bd1: 35317291-35318290 Brachypodium distachyon
Bradi1g38760 2.0kb upstream 2.0kb upstream 6853 true Bd1: 35318291-35325143 Brachypodium distachyon
Bradi1g38760 2.0kb upstream 2.0kb upstream 2000 false Bd1: 35323144-35325143 Brachypodium distachyon
Bradi1g38760 2.0kb downstream 2.0kb downstream 6853 true Bd1: 35316291-35323143 Brachypodium distachyon
Bradi1g38760 2.0kb downstream 2.0kb downstream 2000 false Bd1: 35316291-35318290 Brachypodium distachyon
Bradi1g38760 5.0kb upstream 5.0kb upstream 9853 true Bd1: 35318291-35328143 Brachypodium distachyon
Bradi1g38760 5.0kb upstream 5.0kb upstream 5000 false Bd1: 35323144-35328143 Brachypodium distachyon
Bradi1g38760 5.0kb downstream 5.0kb downstream 9853 true Bd1: 35313291-35323143 Brachypodium distachyon
Bradi1g38760 5.0kb downstream 5.0kb downstream 5000 false Bd1: 35313291-35318290 Brachypodium distachyon
Bradi1g38760 10.0kb upstream 10.0kb upstream 14853 true Bd1: 35318291-35333143 Brachypodium distachyon
Bradi1g38760 10.0kb upstream 10.0kb upstream 10000 false Bd1: 35323144-35333143 Brachypodium distachyon
Bradi1g38760 10.0kb downstream 10.0kb downstream 14853 true Bd1: 35308291-35323143 Brachypodium distachyon
Bradi1g38760 10.0kb downstream 10.0kb downstream 10000 false Bd1: 35308291-35318290 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578685 5269 Grass View MSA
122047245 5273 Angiosperm View MSA
121350648 5274 Embryophyte View MSA
123428584 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.537       Low
cufflinks 10.052        
cufflinks 10.809     High  
cufflinks 10.811     High  
cufflinks 10.695     High  
cufflinks 9.573     High  
cufflinks 9.576     High  
cufflinks 9.723     High  
cufflinks 10.122     High  
cufflinks 11.464     High  
cufflinks 10.215     High  
cufflinks 9.976     High  
cufflinks 10.49     High  
cufflinks 10.562     High  
cufflinks 8.593     High  
cufflinks 10.562     High  
cufflinks 11.612     High  
cufflinks 9.035        
cufflinks 11.768        
cufflinks 15.563     High  
cufflinks 12.181     High  
cufflinks 10.018        
cufflinks 9.972     High  
cufflinks 9.734     High  
cufflinks 9.249        
cufflinks 11.479     High  
cufflinks 9.501     High  
cufflinks 10.601        
cufflinks 9.959        
cufflinks 10.453        

0 Strain