Gene : Bradi5g23821 B. distachyon v3.1
Defline:  (1 of 5) PTHR19376:SF38 - DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA'' Genomic Order:  2804
Name:  ? Bradi5g23821 Secondary Identifier:  ? PAC:32807198
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g23821 0.5kb upstream 0.5kb upstream 4942 true Bd5: 25785226-25790167 Brachypodium distachyon
Bradi5g23821 0.5kb upstream 0.5kb upstream 500 false Bd5: 25785226-25785725 Brachypodium distachyon
Bradi5g23821 0.5kb downstream 0.5kb downstream 4942 true Bd5: 25785726-25790667 Brachypodium distachyon
Bradi5g23821 0.5kb downstream 0.5kb downstream 500 false Bd5: 25790168-25790667 Brachypodium distachyon
Bradi5g23821 1.0kb upstream 1.0kb upstream 5442 true Bd5: 25784726-25790167 Brachypodium distachyon
Bradi5g23821 1.0kb upstream 1.0kb upstream 1000 false Bd5: 25784726-25785725 Brachypodium distachyon
Bradi5g23821 1.0kb downstream 1.0kb downstream 5442 true Bd5: 25785726-25791167 Brachypodium distachyon
Bradi5g23821 1.0kb downstream 1.0kb downstream 1000 false Bd5: 25790168-25791167 Brachypodium distachyon
Bradi5g23821 2.0kb upstream 2.0kb upstream 6442 true Bd5: 25783726-25790167 Brachypodium distachyon
Bradi5g23821 2.0kb upstream 2.0kb upstream 2000 false Bd5: 25783726-25785725 Brachypodium distachyon
Bradi5g23821 2.0kb downstream 2.0kb downstream 6442 true Bd5: 25785726-25792167 Brachypodium distachyon
Bradi5g23821 2.0kb downstream 2.0kb downstream 2000 false Bd5: 25790168-25792167 Brachypodium distachyon
Bradi5g23821 5.0kb upstream 5.0kb upstream 9442 true Bd5: 25780726-25790167 Brachypodium distachyon
Bradi5g23821 5.0kb upstream 5.0kb upstream 5000 false Bd5: 25780726-25785725 Brachypodium distachyon
Bradi5g23821 5.0kb downstream 5.0kb downstream 9442 true Bd5: 25785726-25795167 Brachypodium distachyon
Bradi5g23821 5.0kb downstream 5.0kb downstream 5000 false Bd5: 25790168-25795167 Brachypodium distachyon
Bradi5g23821 10.0kb upstream 10.0kb upstream 14442 true Bd5: 25775726-25790167 Brachypodium distachyon
Bradi5g23821 10.0kb upstream 10.0kb upstream 10000 false Bd5: 25775726-25785725 Brachypodium distachyon
Bradi5g23821 10.0kb downstream 10.0kb downstream 14442 true Bd5: 25785726-25800167 Brachypodium distachyon
Bradi5g23821 10.0kb downstream 10.0kb downstream 10000 false Bd5: 25790168-25800167 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124591071 5269 Grass View MSA
122050148 5273 Angiosperm View MSA
121311763 5274 Embryophyte View MSA
123426642 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain