Gene : Bradi5g24170 B. distachyon v3.1
Defline:  (1 of 1) PTHR11814//PTHR11814:SF87 - SULFATE TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  2863
Name:  ? Bradi5g24170 Secondary Identifier:  ? PAC:32810404
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g24170 0.5kb upstream 0.5kb upstream 5271 true Bd5: 26078906-26084176 Brachypodium distachyon
Bradi5g24170 0.5kb upstream 0.5kb upstream 500 false Bd5: 26078906-26079405 Brachypodium distachyon
Bradi5g24170 0.5kb downstream 0.5kb downstream 5271 true Bd5: 26079406-26084676 Brachypodium distachyon
Bradi5g24170 0.5kb downstream 0.5kb downstream 500 false Bd5: 26084177-26084676 Brachypodium distachyon
Bradi5g24170 1.0kb upstream 1.0kb upstream 5771 true Bd5: 26078406-26084176 Brachypodium distachyon
Bradi5g24170 1.0kb upstream 1.0kb upstream 1000 false Bd5: 26078406-26079405 Brachypodium distachyon
Bradi5g24170 1.0kb downstream 1.0kb downstream 5771 true Bd5: 26079406-26085176 Brachypodium distachyon
Bradi5g24170 1.0kb downstream 1.0kb downstream 1000 false Bd5: 26084177-26085176 Brachypodium distachyon
Bradi5g24170 2.0kb upstream 2.0kb upstream 6771 true Bd5: 26077406-26084176 Brachypodium distachyon
Bradi5g24170 2.0kb upstream 2.0kb upstream 2000 false Bd5: 26077406-26079405 Brachypodium distachyon
Bradi5g24170 2.0kb downstream 2.0kb downstream 6771 true Bd5: 26079406-26086176 Brachypodium distachyon
Bradi5g24170 2.0kb downstream 2.0kb downstream 2000 false Bd5: 26084177-26086176 Brachypodium distachyon
Bradi5g24170 5.0kb upstream 5.0kb upstream 9771 true Bd5: 26074406-26084176 Brachypodium distachyon
Bradi5g24170 5.0kb upstream 5.0kb upstream 5000 false Bd5: 26074406-26079405 Brachypodium distachyon
Bradi5g24170 5.0kb downstream 5.0kb downstream 9771 true Bd5: 26079406-26089176 Brachypodium distachyon
Bradi5g24170 5.0kb downstream 5.0kb downstream 5000 false Bd5: 26084177-26089176 Brachypodium distachyon
Bradi5g24170 10.0kb upstream 10.0kb upstream 14771 true Bd5: 26069406-26084176 Brachypodium distachyon
Bradi5g24170 10.0kb upstream 10.0kb upstream 10000 false Bd5: 26069406-26079405 Brachypodium distachyon
Bradi5g24170 10.0kb downstream 10.0kb downstream 14771 true Bd5: 26079406-26094176 Brachypodium distachyon
Bradi5g24170 10.0kb downstream 10.0kb downstream 10000 false Bd5: 26084177-26094176 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576085 5269 Grass View MSA
122045826 5273 Angiosperm View MSA
123429043 5275 Viridiplantae View MSA
121310509 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.073        
cufflinks 14.63     High  
cufflinks 16.181     High High
cufflinks 13.312     High  
cufflinks 3.509       Low
cufflinks 11.638     High  
cufflinks 10.954     High  
cufflinks 7.488        
cufflinks 10.869     High  
cufflinks 8.349        
cufflinks 15.575     High High
cufflinks 9.285     High  
cufflinks 12.664     High  
cufflinks 14.505     High  
cufflinks 6.18        
cufflinks 14.489     High  
cufflinks 4.386       Low
cufflinks 5.29        
cufflinks 2.936       Low
cufflinks 5.715        
cufflinks 5.717        
cufflinks 9.044        
cufflinks 7.465        
cufflinks 11.344     High  
cufflinks 9.295        
cufflinks 18.449     High High
cufflinks 14.314     High  
cufflinks 13.836     High  
cufflinks 10.726        
cufflinks 4.192       Low

0 Strain