Gene : Bradi5g23867 B. distachyon v3.1
Defline:  (1 of 2) PTHR36082:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT IX Genomic Order:  2816
Name:  ? Bradi5g23867 Secondary Identifier:  ? PAC:32810271
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g23867 0.5kb upstream 0.5kb upstream 1341 true Bd5: 25818515-25819855 Brachypodium distachyon
Bradi5g23867 0.5kb upstream 0.5kb upstream 500 false Bd5: 25819356-25819855 Brachypodium distachyon
Bradi5g23867 0.5kb downstream 0.5kb downstream 1341 true Bd5: 25818015-25819355 Brachypodium distachyon
Bradi5g23867 0.5kb downstream 0.5kb downstream 500 false Bd5: 25818015-25818514 Brachypodium distachyon
Bradi5g23867 1.0kb upstream 1.0kb upstream 1841 true Bd5: 25818515-25820355 Brachypodium distachyon
Bradi5g23867 1.0kb upstream 1.0kb upstream 1000 false Bd5: 25819356-25820355 Brachypodium distachyon
Bradi5g23867 1.0kb downstream 1.0kb downstream 1841 true Bd5: 25817515-25819355 Brachypodium distachyon
Bradi5g23867 1.0kb downstream 1.0kb downstream 1000 false Bd5: 25817515-25818514 Brachypodium distachyon
Bradi5g23867 2.0kb upstream 2.0kb upstream 2841 true Bd5: 25818515-25821355 Brachypodium distachyon
Bradi5g23867 2.0kb upstream 2.0kb upstream 2000 false Bd5: 25819356-25821355 Brachypodium distachyon
Bradi5g23867 2.0kb downstream 2.0kb downstream 2841 true Bd5: 25816515-25819355 Brachypodium distachyon
Bradi5g23867 2.0kb downstream 2.0kb downstream 2000 false Bd5: 25816515-25818514 Brachypodium distachyon
Bradi5g23867 5.0kb upstream 5.0kb upstream 5841 true Bd5: 25818515-25824355 Brachypodium distachyon
Bradi5g23867 5.0kb upstream 5.0kb upstream 5000 false Bd5: 25819356-25824355 Brachypodium distachyon
Bradi5g23867 5.0kb downstream 5.0kb downstream 5841 true Bd5: 25813515-25819355 Brachypodium distachyon
Bradi5g23867 5.0kb downstream 5.0kb downstream 5000 false Bd5: 25813515-25818514 Brachypodium distachyon
Bradi5g23867 10.0kb upstream 10.0kb upstream 10841 true Bd5: 25818515-25829355 Brachypodium distachyon
Bradi5g23867 10.0kb upstream 10.0kb upstream 10000 false Bd5: 25819356-25829355 Brachypodium distachyon
Bradi5g23867 10.0kb downstream 10.0kb downstream 10841 true Bd5: 25808515-25819355 Brachypodium distachyon
Bradi5g23867 10.0kb downstream 10.0kb downstream 10000 false Bd5: 25808515-25818514 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029213 5273 Angiosperm View MSA
124581561 5269 Grass View MSA
121298583 5274 Embryophyte View MSA
123336547 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 0.03     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.104       High
cufflinks 0.019     Low  
cufflinks 0.018     Low  
cufflinks 0.088       High
cufflinks 0.022     Low  
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain