Gene : Bradi5g23836 B. distachyon v3.1
Defline:  (1 of 2) KOG4665 - ATP synthase F0 subunit 6 and related proteins Genomic Order:  2806
Name:  ? Bradi5g23836 Secondary Identifier:  ? PAC:32807413
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7219 Brachypodium distachyon pathologic  
Bdistachyon PWY-7229 Brachypodium distachyon pathologic  
Bdistachyon PWY-841 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g23836 0.5kb upstream 0.5kb upstream 1550 true Bd5: 25790935-25792484 Brachypodium distachyon
Bradi5g23836 0.5kb upstream 0.5kb upstream 500 false Bd5: 25790935-25791434 Brachypodium distachyon
Bradi5g23836 0.5kb downstream 0.5kb downstream 1550 true Bd5: 25791435-25792984 Brachypodium distachyon
Bradi5g23836 0.5kb downstream 0.5kb downstream 500 false Bd5: 25792485-25792984 Brachypodium distachyon
Bradi5g23836 1.0kb upstream 1.0kb upstream 2050 true Bd5: 25790435-25792484 Brachypodium distachyon
Bradi5g23836 1.0kb upstream 1.0kb upstream 1000 false Bd5: 25790435-25791434 Brachypodium distachyon
Bradi5g23836 1.0kb downstream 1.0kb downstream 2050 true Bd5: 25791435-25793484 Brachypodium distachyon
Bradi5g23836 1.0kb downstream 1.0kb downstream 1000 false Bd5: 25792485-25793484 Brachypodium distachyon
Bradi5g23836 2.0kb upstream 2.0kb upstream 3050 true Bd5: 25789435-25792484 Brachypodium distachyon
Bradi5g23836 2.0kb upstream 2.0kb upstream 2000 false Bd5: 25789435-25791434 Brachypodium distachyon
Bradi5g23836 2.0kb downstream 2.0kb downstream 3050 true Bd5: 25791435-25794484 Brachypodium distachyon
Bradi5g23836 2.0kb downstream 2.0kb downstream 2000 false Bd5: 25792485-25794484 Brachypodium distachyon
Bradi5g23836 5.0kb upstream 5.0kb upstream 6050 true Bd5: 25786435-25792484 Brachypodium distachyon
Bradi5g23836 5.0kb upstream 5.0kb upstream 5000 false Bd5: 25786435-25791434 Brachypodium distachyon
Bradi5g23836 5.0kb downstream 5.0kb downstream 6050 true Bd5: 25791435-25797484 Brachypodium distachyon
Bradi5g23836 5.0kb downstream 5.0kb downstream 5000 false Bd5: 25792485-25797484 Brachypodium distachyon
Bradi5g23836 10.0kb upstream 10.0kb upstream 11050 true Bd5: 25781435-25792484 Brachypodium distachyon
Bradi5g23836 10.0kb upstream 10.0kb upstream 10000 false Bd5: 25781435-25791434 Brachypodium distachyon
Bradi5g23836 10.0kb downstream 10.0kb downstream 11050 true Bd5: 25791435-25802484 Brachypodium distachyon
Bradi5g23836 10.0kb downstream 10.0kb downstream 10000 false Bd5: 25792485-25802484 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029216 5273 Angiosperm View MSA
124584923 5269 Grass View MSA
121348660 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain