Gene : Bradi1g39195 B. distachyon v3.1
Defline:  (1 of 5) PTHR19376:SF38 - DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA'' Genomic Order:  4997
Name:  ? Bradi1g39195 Secondary Identifier:  ? PAC:32799505
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g39195 0.5kb upstream 0.5kb upstream 9683 true Bd1: 35904603-35914285 Brachypodium distachyon
Bradi1g39195 0.5kb upstream 0.5kb upstream 500 false Bd1: 35904603-35905102 Brachypodium distachyon
Bradi1g39195 0.5kb downstream 0.5kb downstream 9683 true Bd1: 35905103-35914785 Brachypodium distachyon
Bradi1g39195 0.5kb downstream 0.5kb downstream 500 false Bd1: 35914286-35914785 Brachypodium distachyon
Bradi1g39195 1.0kb upstream 1.0kb upstream 10183 true Bd1: 35904103-35914285 Brachypodium distachyon
Bradi1g39195 1.0kb upstream 1.0kb upstream 1000 false Bd1: 35904103-35905102 Brachypodium distachyon
Bradi1g39195 1.0kb downstream 1.0kb downstream 10183 true Bd1: 35905103-35915285 Brachypodium distachyon
Bradi1g39195 1.0kb downstream 1.0kb downstream 1000 false Bd1: 35914286-35915285 Brachypodium distachyon
Bradi1g39195 2.0kb upstream 2.0kb upstream 11183 true Bd1: 35903103-35914285 Brachypodium distachyon
Bradi1g39195 2.0kb upstream 2.0kb upstream 2000 false Bd1: 35903103-35905102 Brachypodium distachyon
Bradi1g39195 2.0kb downstream 2.0kb downstream 11183 true Bd1: 35905103-35916285 Brachypodium distachyon
Bradi1g39195 2.0kb downstream 2.0kb downstream 2000 false Bd1: 35914286-35916285 Brachypodium distachyon
Bradi1g39195 5.0kb upstream 5.0kb upstream 14183 true Bd1: 35900103-35914285 Brachypodium distachyon
Bradi1g39195 5.0kb upstream 5.0kb upstream 5000 false Bd1: 35900103-35905102 Brachypodium distachyon
Bradi1g39195 5.0kb downstream 5.0kb downstream 14183 true Bd1: 35905103-35919285 Brachypodium distachyon
Bradi1g39195 5.0kb downstream 5.0kb downstream 5000 false Bd1: 35914286-35919285 Brachypodium distachyon
Bradi1g39195 10.0kb upstream 10.0kb upstream 19183 true Bd1: 35895103-35914285 Brachypodium distachyon
Bradi1g39195 10.0kb upstream 10.0kb upstream 10000 false Bd1: 35895103-35905102 Brachypodium distachyon
Bradi1g39195 10.0kb downstream 10.0kb downstream 19183 true Bd1: 35905103-35924285 Brachypodium distachyon
Bradi1g39195 10.0kb downstream 10.0kb downstream 10000 false Bd1: 35914286-35924285 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124591071 5269 Grass View MSA
122050148 5273 Angiosperm View MSA
121311763 5274 Embryophyte View MSA
123426642 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.001     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.002     Low  
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.002     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain