Gene : Bradi5g23470 B. distachyon v3.1
Defline:  (1 of 1) PTHR30620//PTHR30620:SF40 - PERIPLASMIC BETA-GLUCOSIDASE-RELATED // BETA-D-XYLOSIDASE 3-RELATED Genomic Order:  2758
Name:  ? Bradi5g23470 Secondary Identifier:  ? PAC:32811483
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g23470 0.5kb upstream 0.5kb upstream 8468 true Bd5: 25556933-25565400 Brachypodium distachyon
Bradi5g23470 0.5kb upstream 0.5kb upstream 500 false Bd5: 25564901-25565400 Brachypodium distachyon
Bradi5g23470 0.5kb downstream 0.5kb downstream 8468 true Bd5: 25556433-25564900 Brachypodium distachyon
Bradi5g23470 0.5kb downstream 0.5kb downstream 500 false Bd5: 25556433-25556932 Brachypodium distachyon
Bradi5g23470 1.0kb upstream 1.0kb upstream 8968 true Bd5: 25556933-25565900 Brachypodium distachyon
Bradi5g23470 1.0kb upstream 1.0kb upstream 1000 false Bd5: 25564901-25565900 Brachypodium distachyon
Bradi5g23470 1.0kb downstream 1.0kb downstream 8968 true Bd5: 25555933-25564900 Brachypodium distachyon
Bradi5g23470 1.0kb downstream 1.0kb downstream 1000 false Bd5: 25555933-25556932 Brachypodium distachyon
Bradi5g23470 2.0kb upstream 2.0kb upstream 9968 true Bd5: 25556933-25566900 Brachypodium distachyon
Bradi5g23470 2.0kb upstream 2.0kb upstream 2000 false Bd5: 25564901-25566900 Brachypodium distachyon
Bradi5g23470 2.0kb downstream 2.0kb downstream 9968 true Bd5: 25554933-25564900 Brachypodium distachyon
Bradi5g23470 2.0kb downstream 2.0kb downstream 2000 false Bd5: 25554933-25556932 Brachypodium distachyon
Bradi5g23470 5.0kb upstream 5.0kb upstream 12968 true Bd5: 25556933-25569900 Brachypodium distachyon
Bradi5g23470 5.0kb upstream 5.0kb upstream 5000 false Bd5: 25564901-25569900 Brachypodium distachyon
Bradi5g23470 5.0kb downstream 5.0kb downstream 12968 true Bd5: 25551933-25564900 Brachypodium distachyon
Bradi5g23470 5.0kb downstream 5.0kb downstream 5000 false Bd5: 25551933-25556932 Brachypodium distachyon
Bradi5g23470 10.0kb upstream 10.0kb upstream 17968 true Bd5: 25556933-25574900 Brachypodium distachyon
Bradi5g23470 10.0kb upstream 10.0kb upstream 10000 false Bd5: 25564901-25574900 Brachypodium distachyon
Bradi5g23470 10.0kb downstream 10.0kb downstream 17968 true Bd5: 25546933-25564900 Brachypodium distachyon
Bradi5g23470 10.0kb downstream 10.0kb downstream 10000 false Bd5: 25546933-25556932 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568575 5269 Grass View MSA
122044178 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.176     High  
cufflinks 14.601     High  
cufflinks 17.152     High  
cufflinks 14.613     High  
cufflinks 9.929     High  
cufflinks 14.081     High  
cufflinks 12.951     High  
cufflinks 11.914     High  
cufflinks 15.413     High  
cufflinks 14.353     High  
cufflinks 0.074       Low
cufflinks 9.974     High  
cufflinks 2.077        
cufflinks 0.104       Low
cufflinks 7.657        
cufflinks 14.85     High  
cufflinks 12.07     High  
cufflinks 8.952        
cufflinks 11.004        
cufflinks 2.027        
cufflinks 14.074     High  
cufflinks 14.157     High  
cufflinks 12.652     High  
cufflinks 14.422     High  
cufflinks 13.237     High  
cufflinks 15.466     High  
cufflinks 0.097       Low
cufflinks 15.29     High  
cufflinks 15.977     High  
cufflinks 19.122     High  

0 Strain