Gene : Bradi5g23230 B. distachyon v3.1
Defline:  (1 of 2) K10865 - double-strand break repair protein MRE11 (MRE11) Genomic Order:  2728
Name:  ? Bradi5g23230 Secondary Identifier:  ? PAC:32808517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g23230 0.5kb upstream 0.5kb upstream 6677 true Bd5: 25401311-25407987 Brachypodium distachyon
Bradi5g23230 0.5kb upstream 0.5kb upstream 500 false Bd5: 25401311-25401810 Brachypodium distachyon
Bradi5g23230 0.5kb downstream 0.5kb downstream 6677 true Bd5: 25401811-25408487 Brachypodium distachyon
Bradi5g23230 0.5kb downstream 0.5kb downstream 500 false Bd5: 25407988-25408487 Brachypodium distachyon
Bradi5g23230 1.0kb upstream 1.0kb upstream 7177 true Bd5: 25400811-25407987 Brachypodium distachyon
Bradi5g23230 1.0kb upstream 1.0kb upstream 1000 false Bd5: 25400811-25401810 Brachypodium distachyon
Bradi5g23230 1.0kb downstream 1.0kb downstream 7177 true Bd5: 25401811-25408987 Brachypodium distachyon
Bradi5g23230 1.0kb downstream 1.0kb downstream 1000 false Bd5: 25407988-25408987 Brachypodium distachyon
Bradi5g23230 2.0kb upstream 2.0kb upstream 8177 true Bd5: 25399811-25407987 Brachypodium distachyon
Bradi5g23230 2.0kb upstream 2.0kb upstream 2000 false Bd5: 25399811-25401810 Brachypodium distachyon
Bradi5g23230 2.0kb downstream 2.0kb downstream 8177 true Bd5: 25401811-25409987 Brachypodium distachyon
Bradi5g23230 2.0kb downstream 2.0kb downstream 2000 false Bd5: 25407988-25409987 Brachypodium distachyon
Bradi5g23230 5.0kb upstream 5.0kb upstream 11177 true Bd5: 25396811-25407987 Brachypodium distachyon
Bradi5g23230 5.0kb upstream 5.0kb upstream 5000 false Bd5: 25396811-25401810 Brachypodium distachyon
Bradi5g23230 5.0kb downstream 5.0kb downstream 11177 true Bd5: 25401811-25412987 Brachypodium distachyon
Bradi5g23230 5.0kb downstream 5.0kb downstream 5000 false Bd5: 25407988-25412987 Brachypodium distachyon
Bradi5g23230 10.0kb upstream 10.0kb upstream 16177 true Bd5: 25391811-25407987 Brachypodium distachyon
Bradi5g23230 10.0kb upstream 10.0kb upstream 10000 false Bd5: 25391811-25401810 Brachypodium distachyon
Bradi5g23230 10.0kb downstream 10.0kb downstream 16177 true Bd5: 25401811-25417987 Brachypodium distachyon
Bradi5g23230 10.0kb downstream 10.0kb downstream 10000 false Bd5: 25407988-25417987 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578296 5269 Grass View MSA
122042843 5273 Angiosperm View MSA
121346679 5274 Embryophyte View MSA
123424970 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.214        
cufflinks 0.494       High
cufflinks 0.446        
cufflinks 0.515       High
cufflinks 0.125       Low
cufflinks 0.378        
cufflinks 0.412        
cufflinks 0.257        
cufflinks 0.312        
cufflinks 0.204        
cufflinks 0.34        
cufflinks 0.287        
cufflinks 0.205        
cufflinks 0.19        
cufflinks 0.162        
cufflinks 0.389        
cufflinks 0.174        
cufflinks 0.663       High
cufflinks 0.416        
cufflinks 0.15       Low
cufflinks 0.244        
cufflinks 0.356        
cufflinks 0.241        
cufflinks 0.263        
cufflinks 0.36        
cufflinks 0.358        
cufflinks 0.257        
cufflinks 0.328        
cufflinks 0.314        
cufflinks 0.313        

0 Strain