Gene : Bradi5g23320 B. distachyon v3.1
Defline:  (1 of 1) PTHR15415 - MITOFILIN Genomic Order:  2738
Name:  ? Bradi5g23320 Secondary Identifier:  ? PAC:32808203
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g23320 0.5kb upstream 0.5kb upstream 7434 true Bd5: 25446567-25454000 Brachypodium distachyon
Bradi5g23320 0.5kb upstream 0.5kb upstream 500 false Bd5: 25453501-25454000 Brachypodium distachyon
Bradi5g23320 0.5kb downstream 0.5kb downstream 7434 true Bd5: 25446067-25453500 Brachypodium distachyon
Bradi5g23320 0.5kb downstream 0.5kb downstream 500 false Bd5: 25446067-25446566 Brachypodium distachyon
Bradi5g23320 1.0kb upstream 1.0kb upstream 7934 true Bd5: 25446567-25454500 Brachypodium distachyon
Bradi5g23320 1.0kb upstream 1.0kb upstream 1000 false Bd5: 25453501-25454500 Brachypodium distachyon
Bradi5g23320 1.0kb downstream 1.0kb downstream 7934 true Bd5: 25445567-25453500 Brachypodium distachyon
Bradi5g23320 1.0kb downstream 1.0kb downstream 1000 false Bd5: 25445567-25446566 Brachypodium distachyon
Bradi5g23320 2.0kb upstream 2.0kb upstream 8934 true Bd5: 25446567-25455500 Brachypodium distachyon
Bradi5g23320 2.0kb upstream 2.0kb upstream 2000 false Bd5: 25453501-25455500 Brachypodium distachyon
Bradi5g23320 2.0kb downstream 2.0kb downstream 8934 true Bd5: 25444567-25453500 Brachypodium distachyon
Bradi5g23320 2.0kb downstream 2.0kb downstream 2000 false Bd5: 25444567-25446566 Brachypodium distachyon
Bradi5g23320 5.0kb upstream 5.0kb upstream 11934 true Bd5: 25446567-25458500 Brachypodium distachyon
Bradi5g23320 5.0kb upstream 5.0kb upstream 5000 false Bd5: 25453501-25458500 Brachypodium distachyon
Bradi5g23320 5.0kb downstream 5.0kb downstream 11934 true Bd5: 25441567-25453500 Brachypodium distachyon
Bradi5g23320 5.0kb downstream 5.0kb downstream 5000 false Bd5: 25441567-25446566 Brachypodium distachyon
Bradi5g23320 10.0kb upstream 10.0kb upstream 16934 true Bd5: 25446567-25463500 Brachypodium distachyon
Bradi5g23320 10.0kb upstream 10.0kb upstream 10000 false Bd5: 25453501-25463500 Brachypodium distachyon
Bradi5g23320 10.0kb downstream 10.0kb downstream 16934 true Bd5: 25436567-25453500 Brachypodium distachyon
Bradi5g23320 10.0kb downstream 10.0kb downstream 10000 false Bd5: 25436567-25446566 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571715 5269 Grass View MSA
122049408 5273 Angiosperm View MSA
121349104 5274 Embryophyte View MSA
123425291 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.672        
cufflinks 4.718        
cufflinks 4.281        
cufflinks 3.946        
cufflinks 2.407        
cufflinks 4.244        
cufflinks 3.956        
cufflinks 3.918        
cufflinks 4.203        
cufflinks 3.033        
cufflinks 2.312       Low
cufflinks 4.226        
cufflinks 2.529        
cufflinks 2.321       Low
cufflinks 4.055        
cufflinks 4.706        
cufflinks 3.349        
cufflinks 7.175       High
cufflinks 2.778        
cufflinks 1.06       Low
cufflinks 3.973        
cufflinks 4.34        
cufflinks 3.877        
cufflinks 3.959        
cufflinks 3.762        
cufflinks 3.641        
cufflinks 3.033        
cufflinks 3.485        
cufflinks 3.863        
cufflinks 4.717        

0 Strain