Gene : Bradi5g21336 B. distachyon v3.1
Defline:  (1 of 2) PTHR12387 - 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8 Genomic Order:  2478
Name:  ? Bradi5g21336 Secondary Identifier:  ? PAC:32808095
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g21336 0.5kb upstream 0.5kb upstream 3651 true Bd5: 24146675-24150325 Brachypodium distachyon
Bradi5g21336 0.5kb upstream 0.5kb upstream 500 false Bd5: 24149826-24150325 Brachypodium distachyon
Bradi5g21336 0.5kb downstream 0.5kb downstream 3651 true Bd5: 24146175-24149825 Brachypodium distachyon
Bradi5g21336 0.5kb downstream 0.5kb downstream 500 false Bd5: 24146175-24146674 Brachypodium distachyon
Bradi5g21336 1.0kb upstream 1.0kb upstream 4151 true Bd5: 24146675-24150825 Brachypodium distachyon
Bradi5g21336 1.0kb upstream 1.0kb upstream 1000 false Bd5: 24149826-24150825 Brachypodium distachyon
Bradi5g21336 1.0kb downstream 1.0kb downstream 4151 true Bd5: 24145675-24149825 Brachypodium distachyon
Bradi5g21336 1.0kb downstream 1.0kb downstream 1000 false Bd5: 24145675-24146674 Brachypodium distachyon
Bradi5g21336 2.0kb upstream 2.0kb upstream 5151 true Bd5: 24146675-24151825 Brachypodium distachyon
Bradi5g21336 2.0kb upstream 2.0kb upstream 2000 false Bd5: 24149826-24151825 Brachypodium distachyon
Bradi5g21336 2.0kb downstream 2.0kb downstream 5151 true Bd5: 24144675-24149825 Brachypodium distachyon
Bradi5g21336 2.0kb downstream 2.0kb downstream 2000 false Bd5: 24144675-24146674 Brachypodium distachyon
Bradi5g21336 5.0kb upstream 5.0kb upstream 8151 true Bd5: 24146675-24154825 Brachypodium distachyon
Bradi5g21336 5.0kb upstream 5.0kb upstream 5000 false Bd5: 24149826-24154825 Brachypodium distachyon
Bradi5g21336 5.0kb downstream 5.0kb downstream 8151 true Bd5: 24141675-24149825 Brachypodium distachyon
Bradi5g21336 5.0kb downstream 5.0kb downstream 5000 false Bd5: 24141675-24146674 Brachypodium distachyon
Bradi5g21336 10.0kb upstream 10.0kb upstream 13151 true Bd5: 24146675-24159825 Brachypodium distachyon
Bradi5g21336 10.0kb upstream 10.0kb upstream 10000 false Bd5: 24149826-24159825 Brachypodium distachyon
Bradi5g21336 10.0kb downstream 10.0kb downstream 13151 true Bd5: 24136675-24149825 Brachypodium distachyon
Bradi5g21336 10.0kb downstream 10.0kb downstream 10000 false Bd5: 24136675-24146674 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121995043 5273 Angiosperm View MSA
124586866 5269 Grass View MSA
121265248 5274 Embryophyte View MSA
123303647 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.072     Low  
cufflinks 0.153        
cufflinks 0.151        
cufflinks 0.065     Low  
cufflinks 0.076     Low  
cufflinks 0.127        
cufflinks 0.088        
cufflinks 0.051     Low  
cufflinks 0.064     Low  
cufflinks 0.13        
cufflinks 0.016     Low Low
cufflinks 0.086        
cufflinks 0.042     Low Low
cufflinks 0.039     Low Low
cufflinks 0.035     Low Low
cufflinks 0.089     Low  
cufflinks 0.199        
cufflinks 0.073     Low  
cufflinks 0.17     Low  
cufflinks 0.022     Low Low
cufflinks 0.174        
cufflinks 0.245       High
cufflinks 0.078     Low  
cufflinks 0.079     Low  
cufflinks 0.174        
cufflinks 0.288       High
cufflinks 0.119        
cufflinks 0.13        
cufflinks 0.174        
cufflinks 0.225       High

0 Strain