Gene : Bradi1g35120 B. distachyon v3.1
Defline:  (1 of 1) PTHR24073//PTHR24073:SF345 - FAMILY NOT NAMED // RAS-RELATED PROTEIN RABA3 Genomic Order:  4488
Name:  ? Bradi1g35120 Secondary Identifier:  ? PAC:32801554
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g35120 0.5kb upstream 0.5kb upstream 1947 true Bd1: 30791620-30793566 Brachypodium distachyon
Bradi1g35120 0.5kb upstream 0.5kb upstream 500 false Bd1: 30793067-30793566 Brachypodium distachyon
Bradi1g35120 0.5kb downstream 0.5kb downstream 1947 true Bd1: 30791120-30793066 Brachypodium distachyon
Bradi1g35120 0.5kb downstream 0.5kb downstream 500 false Bd1: 30791120-30791619 Brachypodium distachyon
Bradi1g35120 1.0kb upstream 1.0kb upstream 2447 true Bd1: 30791620-30794066 Brachypodium distachyon
Bradi1g35120 1.0kb upstream 1.0kb upstream 1000 false Bd1: 30793067-30794066 Brachypodium distachyon
Bradi1g35120 1.0kb downstream 1.0kb downstream 2447 true Bd1: 30790620-30793066 Brachypodium distachyon
Bradi1g35120 1.0kb downstream 1.0kb downstream 1000 false Bd1: 30790620-30791619 Brachypodium distachyon
Bradi1g35120 2.0kb upstream 2.0kb upstream 3447 true Bd1: 30791620-30795066 Brachypodium distachyon
Bradi1g35120 2.0kb upstream 2.0kb upstream 2000 false Bd1: 30793067-30795066 Brachypodium distachyon
Bradi1g35120 2.0kb downstream 2.0kb downstream 3447 true Bd1: 30789620-30793066 Brachypodium distachyon
Bradi1g35120 2.0kb downstream 2.0kb downstream 2000 false Bd1: 30789620-30791619 Brachypodium distachyon
Bradi1g35120 5.0kb upstream 5.0kb upstream 6447 true Bd1: 30791620-30798066 Brachypodium distachyon
Bradi1g35120 5.0kb upstream 5.0kb upstream 5000 false Bd1: 30793067-30798066 Brachypodium distachyon
Bradi1g35120 5.0kb downstream 5.0kb downstream 6447 true Bd1: 30786620-30793066 Brachypodium distachyon
Bradi1g35120 5.0kb downstream 5.0kb downstream 5000 false Bd1: 30786620-30791619 Brachypodium distachyon
Bradi1g35120 10.0kb upstream 10.0kb upstream 11447 true Bd1: 30791620-30803066 Brachypodium distachyon
Bradi1g35120 10.0kb upstream 10.0kb upstream 10000 false Bd1: 30793067-30803066 Brachypodium distachyon
Bradi1g35120 10.0kb downstream 10.0kb downstream 11447 true Bd1: 30781620-30793066 Brachypodium distachyon
Bradi1g35120 10.0kb downstream 10.0kb downstream 10000 false Bd1: 30781620-30791619 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585626 5269 Grass View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.314        
cufflinks 6.434        
cufflinks 7.903        
cufflinks 8.436        
cufflinks 4.19        
cufflinks 7.822        
cufflinks 6.809        
cufflinks 2.435       Low
cufflinks 6.136        
cufflinks 7.982        
cufflinks 9.31     High  
cufflinks 3.601       Low
cufflinks 9.094     High  
cufflinks 9.713     High  
cufflinks 6.181        
cufflinks 6.833        
cufflinks 7.722        
cufflinks 7.367        
cufflinks 8.672        
cufflinks 34.199     High High
cufflinks 2.587       Low
cufflinks 4.348        
cufflinks 2.827       Low
cufflinks 6.416        
cufflinks 8.736        
cufflinks 8.837        
cufflinks 7.383        
cufflinks 7.535        
cufflinks 5.379        
cufflinks 3.259       Low

0 Strain