Gene : Bradi5g22290 B. distachyon v3.1
Defline:  (1 of 1) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  2605
Name:  ? Bradi5g22290 Secondary Identifier:  ? PAC:32807834
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon GLYCLEAV-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g22290 0.5kb upstream 0.5kb upstream 3766 true Bd5: 24863370-24867135 Brachypodium distachyon
Bradi5g22290 0.5kb upstream 0.5kb upstream 500 false Bd5: 24863370-24863869 Brachypodium distachyon
Bradi5g22290 0.5kb downstream 0.5kb downstream 3766 true Bd5: 24863870-24867635 Brachypodium distachyon
Bradi5g22290 0.5kb downstream 0.5kb downstream 500 false Bd5: 24867136-24867635 Brachypodium distachyon
Bradi5g22290 1.0kb upstream 1.0kb upstream 4266 true Bd5: 24862870-24867135 Brachypodium distachyon
Bradi5g22290 1.0kb upstream 1.0kb upstream 1000 false Bd5: 24862870-24863869 Brachypodium distachyon
Bradi5g22290 1.0kb downstream 1.0kb downstream 4266 true Bd5: 24863870-24868135 Brachypodium distachyon
Bradi5g22290 1.0kb downstream 1.0kb downstream 1000 false Bd5: 24867136-24868135 Brachypodium distachyon
Bradi5g22290 2.0kb upstream 2.0kb upstream 5266 true Bd5: 24861870-24867135 Brachypodium distachyon
Bradi5g22290 2.0kb upstream 2.0kb upstream 2000 false Bd5: 24861870-24863869 Brachypodium distachyon
Bradi5g22290 2.0kb downstream 2.0kb downstream 5266 true Bd5: 24863870-24869135 Brachypodium distachyon
Bradi5g22290 2.0kb downstream 2.0kb downstream 2000 false Bd5: 24867136-24869135 Brachypodium distachyon
Bradi5g22290 5.0kb upstream 5.0kb upstream 8266 true Bd5: 24858870-24867135 Brachypodium distachyon
Bradi5g22290 5.0kb upstream 5.0kb upstream 5000 false Bd5: 24858870-24863869 Brachypodium distachyon
Bradi5g22290 5.0kb downstream 5.0kb downstream 8266 true Bd5: 24863870-24872135 Brachypodium distachyon
Bradi5g22290 5.0kb downstream 5.0kb downstream 5000 false Bd5: 24867136-24872135 Brachypodium distachyon
Bradi5g22290 10.0kb upstream 10.0kb upstream 13266 true Bd5: 24853870-24867135 Brachypodium distachyon
Bradi5g22290 10.0kb upstream 10.0kb upstream 10000 false Bd5: 24853870-24863869 Brachypodium distachyon
Bradi5g22290 10.0kb downstream 10.0kb downstream 13266 true Bd5: 24863870-24877135 Brachypodium distachyon
Bradi5g22290 10.0kb downstream 10.0kb downstream 10000 false Bd5: 24867136-24877135 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572395 5269 Grass View MSA
122045036 5273 Angiosperm View MSA
121345728 5274 Embryophyte View MSA
123424844 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 191.856     High  
cufflinks 212.264     High  
cufflinks 266.875     High  
cufflinks 300.424     High  
cufflinks 154.577     High  
cufflinks 170.772     High  
cufflinks 188.515     High  
cufflinks 181.896     High  
cufflinks 162.616     High  
cufflinks 184.272     High  
cufflinks 145.508     High  
cufflinks 129.854     High  
cufflinks 266.772     High  
cufflinks 199.787     High  
cufflinks 210.932     High  
cufflinks 160.91     High  
cufflinks 201.459     High  
cufflinks 17.38     High Low
cufflinks 119.427     High  
cufflinks 42.548     High Low
cufflinks 122.902     High  
cufflinks 148.115     High  
cufflinks 207.228     High  
cufflinks 201.972     High  
cufflinks 196.835     High  
cufflinks 255.729     High  
cufflinks 194.071     High  
cufflinks 248.914     High  
cufflinks 225.49     High  
cufflinks 68.062     High Low

0 Strain