Gene : Bradi1g35830 B. distachyon v3.1
Defline:  (1 of 1) PTHR31867:SF7 - EXPANSIN-A20 Genomic Order:  4575
Name:  ? Bradi1g35830 Secondary Identifier:  ? PAC:32802143
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g35830 0.5kb upstream 0.5kb upstream 3565 true Bd1: 31544739-31548303 Brachypodium distachyon
Bradi1g35830 0.5kb upstream 0.5kb upstream 500 false Bd1: 31547804-31548303 Brachypodium distachyon
Bradi1g35830 0.5kb downstream 0.5kb downstream 3565 true Bd1: 31544239-31547803 Brachypodium distachyon
Bradi1g35830 0.5kb downstream 0.5kb downstream 500 false Bd1: 31544239-31544738 Brachypodium distachyon
Bradi1g35830 1.0kb upstream 1.0kb upstream 4065 true Bd1: 31544739-31548803 Brachypodium distachyon
Bradi1g35830 1.0kb upstream 1.0kb upstream 1000 false Bd1: 31547804-31548803 Brachypodium distachyon
Bradi1g35830 1.0kb downstream 1.0kb downstream 4065 true Bd1: 31543739-31547803 Brachypodium distachyon
Bradi1g35830 1.0kb downstream 1.0kb downstream 1000 false Bd1: 31543739-31544738 Brachypodium distachyon
Bradi1g35830 2.0kb upstream 2.0kb upstream 5065 true Bd1: 31544739-31549803 Brachypodium distachyon
Bradi1g35830 2.0kb upstream 2.0kb upstream 2000 false Bd1: 31547804-31549803 Brachypodium distachyon
Bradi1g35830 2.0kb downstream 2.0kb downstream 5065 true Bd1: 31542739-31547803 Brachypodium distachyon
Bradi1g35830 2.0kb downstream 2.0kb downstream 2000 false Bd1: 31542739-31544738 Brachypodium distachyon
Bradi1g35830 5.0kb upstream 5.0kb upstream 8065 true Bd1: 31544739-31552803 Brachypodium distachyon
Bradi1g35830 5.0kb upstream 5.0kb upstream 5000 false Bd1: 31547804-31552803 Brachypodium distachyon
Bradi1g35830 5.0kb downstream 5.0kb downstream 8065 true Bd1: 31539739-31547803 Brachypodium distachyon
Bradi1g35830 5.0kb downstream 5.0kb downstream 5000 false Bd1: 31539739-31544738 Brachypodium distachyon
Bradi1g35830 10.0kb upstream 10.0kb upstream 13065 true Bd1: 31544739-31557803 Brachypodium distachyon
Bradi1g35830 10.0kb upstream 10.0kb upstream 10000 false Bd1: 31547804-31557803 Brachypodium distachyon
Bradi1g35830 10.0kb downstream 10.0kb downstream 13065 true Bd1: 31534739-31547803 Brachypodium distachyon
Bradi1g35830 10.0kb downstream 10.0kb downstream 10000 false Bd1: 31534739-31544738 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572124 5269 Grass View MSA
122045799 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121310504 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.343        
cufflinks 0.948        
cufflinks 1.28        
cufflinks 1.078        
cufflinks 0.861        
cufflinks 0.915        
cufflinks 0.921        
cufflinks 0.79        
cufflinks 0.987        
cufflinks 0.977        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.939        
cufflinks 0.099       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.938        
cufflinks 0.92        
cufflinks 1.964        
cufflinks 2.506        
cufflinks 2.711        
cufflinks 0.582        
cufflinks 1.935        
cufflinks 0.825        
cufflinks 0.884        
cufflinks 0.818        
cufflinks 0.781        
cufflinks 0.963        
cufflinks 0.008     Low Low
cufflinks 0.961        
cufflinks 1.162        
cufflinks 2.547        

0 Strain