Gene : Bradi1g35950 B. distachyon v3.1
Defline:  (1 of 2) PF07986 - Tubulin binding cofactor C (TBCC) Genomic Order:  4591
Name:  ? Bradi1g35950 Secondary Identifier:  ? PAC:32799866
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g35950 0.5kb upstream 0.5kb upstream 9507 true Bd1: 31688310-31697816 Brachypodium distachyon
Bradi1g35950 0.5kb upstream 0.5kb upstream 500 false Bd1: 31697317-31697816 Brachypodium distachyon
Bradi1g35950 0.5kb downstream 0.5kb downstream 9507 true Bd1: 31687810-31697316 Brachypodium distachyon
Bradi1g35950 0.5kb downstream 0.5kb downstream 500 false Bd1: 31687810-31688309 Brachypodium distachyon
Bradi1g35950 1.0kb upstream 1.0kb upstream 10007 true Bd1: 31688310-31698316 Brachypodium distachyon
Bradi1g35950 1.0kb upstream 1.0kb upstream 1000 false Bd1: 31697317-31698316 Brachypodium distachyon
Bradi1g35950 1.0kb downstream 1.0kb downstream 10007 true Bd1: 31687310-31697316 Brachypodium distachyon
Bradi1g35950 1.0kb downstream 1.0kb downstream 1000 false Bd1: 31687310-31688309 Brachypodium distachyon
Bradi1g35950 2.0kb upstream 2.0kb upstream 11007 true Bd1: 31688310-31699316 Brachypodium distachyon
Bradi1g35950 2.0kb upstream 2.0kb upstream 2000 false Bd1: 31697317-31699316 Brachypodium distachyon
Bradi1g35950 2.0kb downstream 2.0kb downstream 11007 true Bd1: 31686310-31697316 Brachypodium distachyon
Bradi1g35950 2.0kb downstream 2.0kb downstream 2000 false Bd1: 31686310-31688309 Brachypodium distachyon
Bradi1g35950 5.0kb upstream 5.0kb upstream 14007 true Bd1: 31688310-31702316 Brachypodium distachyon
Bradi1g35950 5.0kb upstream 5.0kb upstream 5000 false Bd1: 31697317-31702316 Brachypodium distachyon
Bradi1g35950 5.0kb downstream 5.0kb downstream 14007 true Bd1: 31683310-31697316 Brachypodium distachyon
Bradi1g35950 5.0kb downstream 5.0kb downstream 5000 false Bd1: 31683310-31688309 Brachypodium distachyon
Bradi1g35950 10.0kb upstream 10.0kb upstream 19007 true Bd1: 31688310-31707316 Brachypodium distachyon
Bradi1g35950 10.0kb upstream 10.0kb upstream 10000 false Bd1: 31697317-31707316 Brachypodium distachyon
Bradi1g35950 10.0kb downstream 10.0kb downstream 19007 true Bd1: 31678310-31697316 Brachypodium distachyon
Bradi1g35950 10.0kb downstream 10.0kb downstream 10000 false Bd1: 31678310-31688309 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572657 5269 Grass View MSA
122043018 5273 Angiosperm View MSA
121349470 5274 Embryophyte View MSA
123427558 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.291        
cufflinks 4.069        
cufflinks 4.294        
cufflinks 3.185        
cufflinks 2.199        
cufflinks 3.759        
cufflinks 3.279        
cufflinks 3.807        
cufflinks 3.679        
cufflinks 2.623        
cufflinks 3.083        
cufflinks 4.421        
cufflinks 2.335        
cufflinks 2.423        
cufflinks 3.127        
cufflinks 4.755        
cufflinks 3.227        
cufflinks 7.806       High
cufflinks 4.674        
cufflinks 0.891       Low
cufflinks 3.526        
cufflinks 4.664        
cufflinks 3.64        
cufflinks 3.769        
cufflinks 3.286        
cufflinks 3.647        
cufflinks 2.737        
cufflinks 3.362        
cufflinks 3.795        
cufflinks 4.748        

0 Strain