Gene : Bradi5g05180 B. distachyon v3.1
Defline:  (1 of 1) PTHR11615//PTHR11615:SF151 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  573
Name:  ? Bradi5g05180 Secondary Identifier:  ? PAC:32810972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g05180 0.5kb upstream 0.5kb upstream 2641 true Bd5: 6721782-6724422 Brachypodium distachyon
Bradi5g05180 0.5kb upstream 0.5kb upstream 500 false Bd5: 6723923-6724422 Brachypodium distachyon
Bradi5g05180 0.5kb downstream 0.5kb downstream 2641 true Bd5: 6721282-6723922 Brachypodium distachyon
Bradi5g05180 0.5kb downstream 0.5kb downstream 500 false Bd5: 6721282-6721781 Brachypodium distachyon
Bradi5g05180 1.0kb upstream 1.0kb upstream 3141 true Bd5: 6721782-6724922 Brachypodium distachyon
Bradi5g05180 1.0kb upstream 1.0kb upstream 1000 false Bd5: 6723923-6724922 Brachypodium distachyon
Bradi5g05180 1.0kb downstream 1.0kb downstream 3141 true Bd5: 6720782-6723922 Brachypodium distachyon
Bradi5g05180 1.0kb downstream 1.0kb downstream 1000 false Bd5: 6720782-6721781 Brachypodium distachyon
Bradi5g05180 2.0kb upstream 2.0kb upstream 4141 true Bd5: 6721782-6725922 Brachypodium distachyon
Bradi5g05180 2.0kb upstream 2.0kb upstream 2000 false Bd5: 6723923-6725922 Brachypodium distachyon
Bradi5g05180 2.0kb downstream 2.0kb downstream 4141 true Bd5: 6719782-6723922 Brachypodium distachyon
Bradi5g05180 2.0kb downstream 2.0kb downstream 2000 false Bd5: 6719782-6721781 Brachypodium distachyon
Bradi5g05180 5.0kb upstream 5.0kb upstream 7141 true Bd5: 6721782-6728922 Brachypodium distachyon
Bradi5g05180 5.0kb upstream 5.0kb upstream 5000 false Bd5: 6723923-6728922 Brachypodium distachyon
Bradi5g05180 5.0kb downstream 5.0kb downstream 7141 true Bd5: 6716782-6723922 Brachypodium distachyon
Bradi5g05180 5.0kb downstream 5.0kb downstream 5000 false Bd5: 6716782-6721781 Brachypodium distachyon
Bradi5g05180 10.0kb upstream 10.0kb upstream 12141 true Bd5: 6721782-6733922 Brachypodium distachyon
Bradi5g05180 10.0kb upstream 10.0kb upstream 10000 false Bd5: 6723923-6733922 Brachypodium distachyon
Bradi5g05180 10.0kb downstream 10.0kb downstream 12141 true Bd5: 6711782-6723922 Brachypodium distachyon
Bradi5g05180 10.0kb downstream 10.0kb downstream 10000 false Bd5: 6711782-6721781 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573099 5269 Grass View MSA
122045392 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.002     High  
cufflinks 17.926     High  
cufflinks 25.23     High  
cufflinks 25.047     High  
cufflinks 25.19     High  
cufflinks 17.114     High  
cufflinks 25.575     High  
cufflinks 16.672     High  
cufflinks 17.271     High  
cufflinks 47.418     High  
cufflinks 4.658       Low
cufflinks 11.951     High  
cufflinks 10.685     High  
cufflinks 4.487       Low
cufflinks 13.967     High  
cufflinks 13.933     High  
cufflinks 31.364     High  
cufflinks 4.804       Low
cufflinks 62.487     High High
cufflinks 54.383     High High
cufflinks 39.096     High  
cufflinks 17.14     High  
cufflinks 19.557     High  
cufflinks 17.846     High  
cufflinks 25.241     High  
cufflinks 29.794     High  
cufflinks 10.88     High  
cufflinks 47.343     High  
cufflinks 33.802     High  
cufflinks 43.401     High  

0 Strain