Gene : Bradi5g04330 B. distachyon v3.1
Defline:  (1 of 1) PTHR22957//PTHR22957:SF272 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  507
Name:  ? Bradi5g04330 Secondary Identifier:  ? PAC:32809841
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g04330 0.5kb upstream 0.5kb upstream 7376 true Bd5: 5538320-5545695 Brachypodium distachyon
Bradi5g04330 0.5kb upstream 0.5kb upstream 500 false Bd5: 5545196-5545695 Brachypodium distachyon
Bradi5g04330 0.5kb downstream 0.5kb downstream 7376 true Bd5: 5537820-5545195 Brachypodium distachyon
Bradi5g04330 0.5kb downstream 0.5kb downstream 500 false Bd5: 5537820-5538319 Brachypodium distachyon
Bradi5g04330 1.0kb upstream 1.0kb upstream 7876 true Bd5: 5538320-5546195 Brachypodium distachyon
Bradi5g04330 1.0kb upstream 1.0kb upstream 1000 false Bd5: 5545196-5546195 Brachypodium distachyon
Bradi5g04330 1.0kb downstream 1.0kb downstream 7876 true Bd5: 5537320-5545195 Brachypodium distachyon
Bradi5g04330 1.0kb downstream 1.0kb downstream 1000 false Bd5: 5537320-5538319 Brachypodium distachyon
Bradi5g04330 2.0kb upstream 2.0kb upstream 8876 true Bd5: 5538320-5547195 Brachypodium distachyon
Bradi5g04330 2.0kb upstream 2.0kb upstream 2000 false Bd5: 5545196-5547195 Brachypodium distachyon
Bradi5g04330 2.0kb downstream 2.0kb downstream 8876 true Bd5: 5536320-5545195 Brachypodium distachyon
Bradi5g04330 2.0kb downstream 2.0kb downstream 2000 false Bd5: 5536320-5538319 Brachypodium distachyon
Bradi5g04330 5.0kb upstream 5.0kb upstream 11876 true Bd5: 5538320-5550195 Brachypodium distachyon
Bradi5g04330 5.0kb upstream 5.0kb upstream 5000 false Bd5: 5545196-5550195 Brachypodium distachyon
Bradi5g04330 5.0kb downstream 5.0kb downstream 11876 true Bd5: 5533320-5545195 Brachypodium distachyon
Bradi5g04330 5.0kb downstream 5.0kb downstream 5000 false Bd5: 5533320-5538319 Brachypodium distachyon
Bradi5g04330 10.0kb upstream 10.0kb upstream 16876 true Bd5: 5538320-5555195 Brachypodium distachyon
Bradi5g04330 10.0kb upstream 10.0kb upstream 10000 false Bd5: 5545196-5555195 Brachypodium distachyon
Bradi5g04330 10.0kb downstream 10.0kb downstream 16876 true Bd5: 5528320-5545195 Brachypodium distachyon
Bradi5g04330 10.0kb downstream 10.0kb downstream 10000 false Bd5: 5528320-5538319 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578882 5269 Grass View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.421        
cufflinks 0.732        
cufflinks 0.574        
cufflinks 0.633        
cufflinks 0.194       Low
cufflinks 0.691        
cufflinks 0.641        
cufflinks 0.571        
cufflinks 0.626        
cufflinks 0.488        
cufflinks 0.61        
cufflinks 0.753        
cufflinks 0.745        
cufflinks 0.604        
cufflinks 0.844       High
cufflinks 0.609        
cufflinks 0.604        
cufflinks 0.445        
cufflinks 0.698        
cufflinks 0.096     Low Low
cufflinks 0.395        
cufflinks 0.663        
cufflinks 0.611        
cufflinks 0.679        
cufflinks 0.631        
cufflinks 0.555        
cufflinks 0.782        
cufflinks 0.569        
cufflinks 0.611        
cufflinks 0.483        

0 Strain