Gene : Bradi5g27057 B. distachyon v3.1
Defline:  (1 of 57) PF00892 - EamA-like transporter family (EamA) Genomic Order:  3237
Name:  ? Bradi5g27057 Secondary Identifier:  ? PAC:32810786
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g27057 0.5kb upstream 0.5kb upstream 4196 true Bd5: 28153523-28157718 Brachypodium distachyon
Bradi5g27057 0.5kb upstream 0.5kb upstream 500 false Bd5: 28157219-28157718 Brachypodium distachyon
Bradi5g27057 0.5kb downstream 0.5kb downstream 4196 true Bd5: 28153023-28157218 Brachypodium distachyon
Bradi5g27057 0.5kb downstream 0.5kb downstream 500 false Bd5: 28153023-28153522 Brachypodium distachyon
Bradi5g27057 1.0kb upstream 1.0kb upstream 4696 true Bd5: 28153523-28158218 Brachypodium distachyon
Bradi5g27057 1.0kb upstream 1.0kb upstream 1000 false Bd5: 28157219-28158218 Brachypodium distachyon
Bradi5g27057 1.0kb downstream 1.0kb downstream 4696 true Bd5: 28152523-28157218 Brachypodium distachyon
Bradi5g27057 1.0kb downstream 1.0kb downstream 1000 false Bd5: 28152523-28153522 Brachypodium distachyon
Bradi5g27057 2.0kb upstream 2.0kb upstream 5696 true Bd5: 28153523-28159218 Brachypodium distachyon
Bradi5g27057 2.0kb upstream 2.0kb upstream 2000 false Bd5: 28157219-28159218 Brachypodium distachyon
Bradi5g27057 2.0kb downstream 2.0kb downstream 5696 true Bd5: 28151523-28157218 Brachypodium distachyon
Bradi5g27057 2.0kb downstream 2.0kb downstream 2000 false Bd5: 28151523-28153522 Brachypodium distachyon
Bradi5g27057 5.0kb upstream 5.0kb upstream 8696 true Bd5: 28153523-28162218 Brachypodium distachyon
Bradi5g27057 5.0kb upstream 5.0kb upstream 5000 false Bd5: 28157219-28162218 Brachypodium distachyon
Bradi5g27057 5.0kb downstream 5.0kb downstream 8696 true Bd5: 28148523-28157218 Brachypodium distachyon
Bradi5g27057 5.0kb downstream 5.0kb downstream 5000 false Bd5: 28148523-28153522 Brachypodium distachyon
Bradi5g27057 10.0kb upstream 10.0kb upstream 13696 true Bd5: 28153523-28167218 Brachypodium distachyon
Bradi5g27057 10.0kb upstream 10.0kb upstream 10000 false Bd5: 28157219-28167218 Brachypodium distachyon
Bradi5g27057 10.0kb downstream 10.0kb downstream 13696 true Bd5: 28143523-28157218 Brachypodium distachyon
Bradi5g27057 10.0kb downstream 10.0kb downstream 10000 false Bd5: 28143523-28153522 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569329 5269 Grass View MSA
122050761 5273 Angiosperm View MSA
121312106 5274 Embryophyte View MSA
123349308 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.062     Low  
cufflinks 0.073     Low  
cufflinks 0.059     Low  
cufflinks 0.051     Low  
cufflinks 0.053     Low  
cufflinks 0.083     Low  
cufflinks 0.075     Low  
cufflinks 0.08     Low  
cufflinks 0.098     Low  
cufflinks 0.034     Low Low
cufflinks 0.057     Low  
cufflinks 0.088        
cufflinks 0.055     Low  
cufflinks 0.035     Low Low
cufflinks 0.059     Low  
cufflinks 0.037     Low  
cufflinks 0.14     Low High
cufflinks 0.05     Low  
cufflinks 0.135     Low High
cufflinks 0.204       High
cufflinks 0.043     Low  
cufflinks 0.057     Low  
cufflinks 0.08     Low  
cufflinks 0.053     Low  
cufflinks 0.095     Low  
cufflinks 0.041     Low  
cufflinks 0.084     Low  
cufflinks 0.055     Low  
cufflinks 0.05     Low  
cufflinks 0.101     Low  

0 Strain