Gene : Bradi1g36810 B. distachyon v3.1
Defline:  (1 of 2) K18723 - nucleoporin GLE1 (GLE1) Genomic Order:  4702
Name:  ? Bradi1g36810 Secondary Identifier:  ? PAC:32800630
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g36810 0.5kb upstream 0.5kb upstream 15889 true Bd1: 32653925-32669813 Brachypodium distachyon
Bradi1g36810 0.5kb upstream 0.5kb upstream 500 false Bd1: 32669314-32669813 Brachypodium distachyon
Bradi1g36810 0.5kb downstream 0.5kb downstream 15889 true Bd1: 32653425-32669313 Brachypodium distachyon
Bradi1g36810 0.5kb downstream 0.5kb downstream 500 false Bd1: 32653425-32653924 Brachypodium distachyon
Bradi1g36810 1.0kb upstream 1.0kb upstream 16389 true Bd1: 32653925-32670313 Brachypodium distachyon
Bradi1g36810 1.0kb upstream 1.0kb upstream 1000 false Bd1: 32669314-32670313 Brachypodium distachyon
Bradi1g36810 1.0kb downstream 1.0kb downstream 16389 true Bd1: 32652925-32669313 Brachypodium distachyon
Bradi1g36810 1.0kb downstream 1.0kb downstream 1000 false Bd1: 32652925-32653924 Brachypodium distachyon
Bradi1g36810 2.0kb upstream 2.0kb upstream 17389 true Bd1: 32653925-32671313 Brachypodium distachyon
Bradi1g36810 2.0kb upstream 2.0kb upstream 2000 false Bd1: 32669314-32671313 Brachypodium distachyon
Bradi1g36810 2.0kb downstream 2.0kb downstream 17389 true Bd1: 32651925-32669313 Brachypodium distachyon
Bradi1g36810 2.0kb downstream 2.0kb downstream 2000 false Bd1: 32651925-32653924 Brachypodium distachyon
Bradi1g36810 5.0kb upstream 5.0kb upstream 20389 true Bd1: 32653925-32674313 Brachypodium distachyon
Bradi1g36810 5.0kb upstream 5.0kb upstream 5000 false Bd1: 32669314-32674313 Brachypodium distachyon
Bradi1g36810 5.0kb downstream 5.0kb downstream 20389 true Bd1: 32648925-32669313 Brachypodium distachyon
Bradi1g36810 5.0kb downstream 5.0kb downstream 5000 false Bd1: 32648925-32653924 Brachypodium distachyon
Bradi1g36810 10.0kb upstream 10.0kb upstream 25389 true Bd1: 32653925-32679313 Brachypodium distachyon
Bradi1g36810 10.0kb upstream 10.0kb upstream 10000 false Bd1: 32669314-32679313 Brachypodium distachyon
Bradi1g36810 10.0kb downstream 10.0kb downstream 25389 true Bd1: 32643925-32669313 Brachypodium distachyon
Bradi1g36810 10.0kb downstream 10.0kb downstream 10000 false Bd1: 32643925-32653924 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576929 5269 Grass View MSA
122045266 5273 Angiosperm View MSA
121346292 5274 Embryophyte View MSA
123425199 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.106        
cufflinks 0.144        
cufflinks 0.154        
cufflinks 0.126        
cufflinks 0.075     Low Low
cufflinks 0.134        
cufflinks 0.121        
cufflinks 0.14        
cufflinks 0.147        
cufflinks 0.153        
cufflinks 0.145        
cufflinks 0.118        
cufflinks 0.137        
cufflinks 0.124        
cufflinks 0.102        
cufflinks 0.134        
cufflinks 0.093     Low Low
cufflinks 0.2       High
cufflinks 0.162     Low High
cufflinks 0.101     Low  
cufflinks 0.094     Low Low
cufflinks 0.191       High
cufflinks 0.132        
cufflinks 0.118        
cufflinks 0.119        
cufflinks 0.144        
cufflinks 0.162       High
cufflinks 0.146        
cufflinks 0.158        
cufflinks 0.11     Low  

0 Strain