Gene : Bradi5g26320 B. distachyon v3.1
Defline:  (1 of 1) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE Genomic Order:  3133
Name:  ? Bradi5g26320 Secondary Identifier:  ? PAC:32809203
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g26320 0.5kb upstream 0.5kb upstream 1880 true Bd5: 27537408-27539287 Brachypodium distachyon
Bradi5g26320 0.5kb upstream 0.5kb upstream 500 false Bd5: 27538788-27539287 Brachypodium distachyon
Bradi5g26320 0.5kb downstream 0.5kb downstream 1880 true Bd5: 27536908-27538787 Brachypodium distachyon
Bradi5g26320 0.5kb downstream 0.5kb downstream 500 false Bd5: 27536908-27537407 Brachypodium distachyon
Bradi5g26320 1.0kb upstream 1.0kb upstream 2380 true Bd5: 27537408-27539787 Brachypodium distachyon
Bradi5g26320 1.0kb upstream 1.0kb upstream 1000 false Bd5: 27538788-27539787 Brachypodium distachyon
Bradi5g26320 1.0kb downstream 1.0kb downstream 2380 true Bd5: 27536408-27538787 Brachypodium distachyon
Bradi5g26320 1.0kb downstream 1.0kb downstream 1000 false Bd5: 27536408-27537407 Brachypodium distachyon
Bradi5g26320 2.0kb upstream 2.0kb upstream 3380 true Bd5: 27537408-27540787 Brachypodium distachyon
Bradi5g26320 2.0kb upstream 2.0kb upstream 2000 false Bd5: 27538788-27540787 Brachypodium distachyon
Bradi5g26320 2.0kb downstream 2.0kb downstream 3380 true Bd5: 27535408-27538787 Brachypodium distachyon
Bradi5g26320 2.0kb downstream 2.0kb downstream 2000 false Bd5: 27535408-27537407 Brachypodium distachyon
Bradi5g26320 5.0kb upstream 5.0kb upstream 6380 true Bd5: 27537408-27543787 Brachypodium distachyon
Bradi5g26320 5.0kb upstream 5.0kb upstream 5000 false Bd5: 27538788-27543787 Brachypodium distachyon
Bradi5g26320 5.0kb downstream 5.0kb downstream 6380 true Bd5: 27532408-27538787 Brachypodium distachyon
Bradi5g26320 5.0kb downstream 5.0kb downstream 5000 false Bd5: 27532408-27537407 Brachypodium distachyon
Bradi5g26320 10.0kb upstream 10.0kb upstream 11380 true Bd5: 27537408-27548787 Brachypodium distachyon
Bradi5g26320 10.0kb upstream 10.0kb upstream 10000 false Bd5: 27538788-27548787 Brachypodium distachyon
Bradi5g26320 10.0kb downstream 10.0kb downstream 11380 true Bd5: 27527408-27538787 Brachypodium distachyon
Bradi5g26320 10.0kb downstream 10.0kb downstream 10000 false Bd5: 27527408-27537407 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572860 5269 Grass View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.7        
cufflinks 4.815        
cufflinks 42.979     High  
cufflinks 2.496       Low
cufflinks 149.387     High High
cufflinks 5.577        
cufflinks 8.719        
cufflinks 3.279       Low
cufflinks 3.25       Low
cufflinks 163.539     High High
cufflinks 37.834     High  
cufflinks 6.354        
cufflinks 29.67     High  
cufflinks 10.979     High  
cufflinks 5.863        
cufflinks 21.943     High  
cufflinks 9.63        
cufflinks 85.241     High High
cufflinks 197.893     High High
cufflinks 211.691     High High
cufflinks 24.199     High  
cufflinks 76.419     High  
cufflinks 4.204        
cufflinks 1.971       Low
cufflinks 3.672       Low
cufflinks 83.053     High High
cufflinks 5.041        
cufflinks 103.611     High High
cufflinks 54.415     High  
cufflinks 32.752     High  

0 Strain