Gene : Bradi5g26217 B. distachyon v3.1
Defline:  (1 of 20) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  3115
Name:  ? Bradi5g26217 Secondary Identifier:  ? PAC:32807794
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g26217 0.5kb upstream 0.5kb upstream 2553 true Bd5: 27456642-27459194 Brachypodium distachyon
Bradi5g26217 0.5kb upstream 0.5kb upstream 500 false Bd5: 27456642-27457141 Brachypodium distachyon
Bradi5g26217 0.5kb downstream 0.5kb downstream 2553 true Bd5: 27457142-27459694 Brachypodium distachyon
Bradi5g26217 0.5kb downstream 0.5kb downstream 500 false Bd5: 27459195-27459694 Brachypodium distachyon
Bradi5g26217 1.0kb upstream 1.0kb upstream 3053 true Bd5: 27456142-27459194 Brachypodium distachyon
Bradi5g26217 1.0kb upstream 1.0kb upstream 1000 false Bd5: 27456142-27457141 Brachypodium distachyon
Bradi5g26217 1.0kb downstream 1.0kb downstream 3053 true Bd5: 27457142-27460194 Brachypodium distachyon
Bradi5g26217 1.0kb downstream 1.0kb downstream 1000 false Bd5: 27459195-27460194 Brachypodium distachyon
Bradi5g26217 2.0kb upstream 2.0kb upstream 4053 true Bd5: 27455142-27459194 Brachypodium distachyon
Bradi5g26217 2.0kb upstream 2.0kb upstream 2000 false Bd5: 27455142-27457141 Brachypodium distachyon
Bradi5g26217 2.0kb downstream 2.0kb downstream 4053 true Bd5: 27457142-27461194 Brachypodium distachyon
Bradi5g26217 2.0kb downstream 2.0kb downstream 2000 false Bd5: 27459195-27461194 Brachypodium distachyon
Bradi5g26217 5.0kb upstream 5.0kb upstream 7053 true Bd5: 27452142-27459194 Brachypodium distachyon
Bradi5g26217 5.0kb upstream 5.0kb upstream 5000 false Bd5: 27452142-27457141 Brachypodium distachyon
Bradi5g26217 5.0kb downstream 5.0kb downstream 7053 true Bd5: 27457142-27464194 Brachypodium distachyon
Bradi5g26217 5.0kb downstream 5.0kb downstream 5000 false Bd5: 27459195-27464194 Brachypodium distachyon
Bradi5g26217 10.0kb upstream 10.0kb upstream 12053 true Bd5: 27447142-27459194 Brachypodium distachyon
Bradi5g26217 10.0kb upstream 10.0kb upstream 10000 false Bd5: 27447142-27457141 Brachypodium distachyon
Bradi5g26217 10.0kb downstream 10.0kb downstream 12053 true Bd5: 27457142-27469194 Brachypodium distachyon
Bradi5g26217 10.0kb downstream 10.0kb downstream 10000 false Bd5: 27459195-27469194 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026895 5273 Angiosperm View MSA
124577764 5269 Grass View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.563        
cufflinks 5.858        
cufflinks 7.286        
cufflinks 4.799        
cufflinks 2.631       Low
cufflinks 4.836        
cufflinks 7.255        
cufflinks 5.082        
cufflinks 6.013        
cufflinks 9.011        
cufflinks 7.829        
cufflinks 2.996       Low
cufflinks 9.251     High  
cufflinks 5.712        
cufflinks 3.383        
cufflinks 4.338        
cufflinks 6.884        
cufflinks 15.292     High High
cufflinks 8.61        
cufflinks 1.037       Low
cufflinks 28.59     High High
cufflinks 6.094        
cufflinks 5.31        
cufflinks 5.302        
cufflinks 5.71        
cufflinks 5.636        
cufflinks 7.386        
cufflinks 8.625        
cufflinks 6.613        
cufflinks 8.773        

0 Strain