Gene : Bradi1g37080 B. distachyon v3.1
Defline:  (1 of 3) K03627 - putative transcription factor (MBF1) Genomic Order:  4733
Name:  ? Bradi1g37080 Secondary Identifier:  ? PAC:32799084
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g37080 0.5kb upstream 0.5kb upstream 1349 true Bd1: 33019688-33021036 Brachypodium distachyon
Bradi1g37080 0.5kb upstream 0.5kb upstream 500 false Bd1: 33019688-33020187 Brachypodium distachyon
Bradi1g37080 0.5kb downstream 0.5kb downstream 1349 true Bd1: 33020188-33021536 Brachypodium distachyon
Bradi1g37080 0.5kb downstream 0.5kb downstream 500 false Bd1: 33021037-33021536 Brachypodium distachyon
Bradi1g37080 1.0kb upstream 1.0kb upstream 1849 true Bd1: 33019188-33021036 Brachypodium distachyon
Bradi1g37080 1.0kb upstream 1.0kb upstream 1000 false Bd1: 33019188-33020187 Brachypodium distachyon
Bradi1g37080 1.0kb downstream 1.0kb downstream 1849 true Bd1: 33020188-33022036 Brachypodium distachyon
Bradi1g37080 1.0kb downstream 1.0kb downstream 1000 false Bd1: 33021037-33022036 Brachypodium distachyon
Bradi1g37080 2.0kb upstream 2.0kb upstream 2849 true Bd1: 33018188-33021036 Brachypodium distachyon
Bradi1g37080 2.0kb upstream 2.0kb upstream 2000 false Bd1: 33018188-33020187 Brachypodium distachyon
Bradi1g37080 2.0kb downstream 2.0kb downstream 2849 true Bd1: 33020188-33023036 Brachypodium distachyon
Bradi1g37080 2.0kb downstream 2.0kb downstream 2000 false Bd1: 33021037-33023036 Brachypodium distachyon
Bradi1g37080 5.0kb upstream 5.0kb upstream 5849 true Bd1: 33015188-33021036 Brachypodium distachyon
Bradi1g37080 5.0kb upstream 5.0kb upstream 5000 false Bd1: 33015188-33020187 Brachypodium distachyon
Bradi1g37080 5.0kb downstream 5.0kb downstream 5849 true Bd1: 33020188-33026036 Brachypodium distachyon
Bradi1g37080 5.0kb downstream 5.0kb downstream 5000 false Bd1: 33021037-33026036 Brachypodium distachyon
Bradi1g37080 10.0kb upstream 10.0kb upstream 10849 true Bd1: 33010188-33021036 Brachypodium distachyon
Bradi1g37080 10.0kb upstream 10.0kb upstream 10000 false Bd1: 33010188-33020187 Brachypodium distachyon
Bradi1g37080 10.0kb downstream 10.0kb downstream 10849 true Bd1: 33020188-33031036 Brachypodium distachyon
Bradi1g37080 10.0kb downstream 10.0kb downstream 10000 false Bd1: 33021037-33031036 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026474 5273 Angiosperm View MSA
124572853 5269 Grass View MSA
121347865 5274 Embryophyte View MSA
123380657 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.398        
cufflinks 0.055     Low Low
cufflinks 0.173        
cufflinks 0.341        
cufflinks 5.108        
cufflinks 0.122       Low
cufflinks 0.173        
cufflinks 4.731        
cufflinks 0.564        
cufflinks 2.152        
cufflinks 3.572        
cufflinks 19.224     High High
cufflinks 0.131       Low
cufflinks 0.426        
cufflinks 2.266        
cufflinks 0.753        
cufflinks 1.09        
cufflinks 0.052     Low Low
cufflinks 60.078     High High
cufflinks 20.183     High High
cufflinks 0.582        
cufflinks 1.054        
cufflinks 6.351        
cufflinks 0.706        
cufflinks 0.587        
cufflinks 0.257        
cufflinks 1.064        
cufflinks 1.059        
cufflinks 0.942        
cufflinks 0.463        

0 Strain