Gene : Bradi5g26880 B. distachyon v3.1
Defline:  (1 of 2) KOG3276 - Uncharacterized conserved protein, contains YggU domain Genomic Order:  3209
Name:  ? Bradi5g26880 Secondary Identifier:  ? PAC:32807327
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g26880 0.5kb upstream 0.5kb upstream 1852 true Bd5: 27941876-27943727 Brachypodium distachyon
Bradi5g26880 0.5kb upstream 0.5kb upstream 500 false Bd5: 27943228-27943727 Brachypodium distachyon
Bradi5g26880 0.5kb downstream 0.5kb downstream 1852 true Bd5: 27941376-27943227 Brachypodium distachyon
Bradi5g26880 0.5kb downstream 0.5kb downstream 500 false Bd5: 27941376-27941875 Brachypodium distachyon
Bradi5g26880 1.0kb upstream 1.0kb upstream 2352 true Bd5: 27941876-27944227 Brachypodium distachyon
Bradi5g26880 1.0kb upstream 1.0kb upstream 1000 false Bd5: 27943228-27944227 Brachypodium distachyon
Bradi5g26880 1.0kb downstream 1.0kb downstream 2352 true Bd5: 27940876-27943227 Brachypodium distachyon
Bradi5g26880 1.0kb downstream 1.0kb downstream 1000 false Bd5: 27940876-27941875 Brachypodium distachyon
Bradi5g26880 2.0kb upstream 2.0kb upstream 3352 true Bd5: 27941876-27945227 Brachypodium distachyon
Bradi5g26880 2.0kb upstream 2.0kb upstream 2000 false Bd5: 27943228-27945227 Brachypodium distachyon
Bradi5g26880 2.0kb downstream 2.0kb downstream 3352 true Bd5: 27939876-27943227 Brachypodium distachyon
Bradi5g26880 2.0kb downstream 2.0kb downstream 2000 false Bd5: 27939876-27941875 Brachypodium distachyon
Bradi5g26880 5.0kb upstream 5.0kb upstream 6352 true Bd5: 27941876-27948227 Brachypodium distachyon
Bradi5g26880 5.0kb upstream 5.0kb upstream 5000 false Bd5: 27943228-27948227 Brachypodium distachyon
Bradi5g26880 5.0kb downstream 5.0kb downstream 6352 true Bd5: 27936876-27943227 Brachypodium distachyon
Bradi5g26880 5.0kb downstream 5.0kb downstream 5000 false Bd5: 27936876-27941875 Brachypodium distachyon
Bradi5g26880 10.0kb upstream 10.0kb upstream 11352 true Bd5: 27941876-27953227 Brachypodium distachyon
Bradi5g26880 10.0kb upstream 10.0kb upstream 10000 false Bd5: 27943228-27953227 Brachypodium distachyon
Bradi5g26880 10.0kb downstream 10.0kb downstream 11352 true Bd5: 27931876-27943227 Brachypodium distachyon
Bradi5g26880 10.0kb downstream 10.0kb downstream 10000 false Bd5: 27931876-27941875 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580180 5269 Grass View MSA
122046724 5273 Angiosperm View MSA
121347959 5274 Embryophyte View MSA
123423816 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.674       Low
cufflinks 3.892        
cufflinks 3.83        
cufflinks 5.768        
cufflinks 3.417        
cufflinks 3.56        
cufflinks 4.385        
cufflinks 2.892        
cufflinks 3.283        
cufflinks 12.345     High High
cufflinks 3.828        
cufflinks 1.896       Low
cufflinks 2.601       Low
cufflinks 4.041        
cufflinks 3.542        
cufflinks 2.25       Low
cufflinks 5.001        
cufflinks 4.331        
cufflinks 8.108        
cufflinks 5.363        
cufflinks 12.415     High High
cufflinks 3.635        
cufflinks 3.919        
cufflinks 4.313        
cufflinks 5.46        
cufflinks 7.6        
cufflinks 5.219        
cufflinks 10.772       High
cufflinks 7.88        
cufflinks 4.508        

0 Strain