Gene : Bradi1g43440 B. distachyon v3.1
Defline:  (1 of 1) PTHR12663:SF0 - PDS5 Genomic Order:  5343
Name:  ? Bradi1g43440 Secondary Identifier:  ? PAC:32798788
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g43440 0.5kb upstream 0.5kb upstream 14507 true Bd1: 41337781-41352287 Brachypodium distachyon
Bradi1g43440 0.5kb upstream 0.5kb upstream 500 false Bd1: 41337781-41338280 Brachypodium distachyon
Bradi1g43440 0.5kb downstream 0.5kb downstream 14507 true Bd1: 41338281-41352787 Brachypodium distachyon
Bradi1g43440 0.5kb downstream 0.5kb downstream 500 false Bd1: 41352288-41352787 Brachypodium distachyon
Bradi1g43440 1.0kb upstream 1.0kb upstream 15007 true Bd1: 41337281-41352287 Brachypodium distachyon
Bradi1g43440 1.0kb upstream 1.0kb upstream 1000 false Bd1: 41337281-41338280 Brachypodium distachyon
Bradi1g43440 1.0kb downstream 1.0kb downstream 15007 true Bd1: 41338281-41353287 Brachypodium distachyon
Bradi1g43440 1.0kb downstream 1.0kb downstream 1000 false Bd1: 41352288-41353287 Brachypodium distachyon
Bradi1g43440 2.0kb upstream 2.0kb upstream 16007 true Bd1: 41336281-41352287 Brachypodium distachyon
Bradi1g43440 2.0kb upstream 2.0kb upstream 2000 false Bd1: 41336281-41338280 Brachypodium distachyon
Bradi1g43440 2.0kb downstream 2.0kb downstream 16007 true Bd1: 41338281-41354287 Brachypodium distachyon
Bradi1g43440 2.0kb downstream 2.0kb downstream 2000 false Bd1: 41352288-41354287 Brachypodium distachyon
Bradi1g43440 5.0kb upstream 5.0kb upstream 19007 true Bd1: 41333281-41352287 Brachypodium distachyon
Bradi1g43440 5.0kb upstream 5.0kb upstream 5000 false Bd1: 41333281-41338280 Brachypodium distachyon
Bradi1g43440 5.0kb downstream 5.0kb downstream 19007 true Bd1: 41338281-41357287 Brachypodium distachyon
Bradi1g43440 5.0kb downstream 5.0kb downstream 5000 false Bd1: 41352288-41357287 Brachypodium distachyon
Bradi1g43440 10.0kb upstream 10.0kb upstream 24007 true Bd1: 41328281-41352287 Brachypodium distachyon
Bradi1g43440 10.0kb upstream 10.0kb upstream 10000 false Bd1: 41328281-41338280 Brachypodium distachyon
Bradi1g43440 10.0kb downstream 10.0kb downstream 24007 true Bd1: 41338281-41362287 Brachypodium distachyon
Bradi1g43440 10.0kb downstream 10.0kb downstream 10000 false Bd1: 41352288-41362287 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577653 5269 Grass View MSA
122045093 5273 Angiosperm View MSA
121348998 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.287        
cufflinks 4.928        
cufflinks 5.324       High
cufflinks 3.792        
cufflinks 1.543       Low
cufflinks 4.544        
cufflinks 4.005        
cufflinks 3.914        
cufflinks 4.474        
cufflinks 2.936        
cufflinks 4.508        
cufflinks 4.628        
cufflinks 3.156        
cufflinks 2.709        
cufflinks 2.094        
cufflinks 4.292        
cufflinks 2.503        
cufflinks 5.352       High
cufflinks 3.465        
cufflinks 1.365       Low
cufflinks 2.569        
cufflinks 5.985       High
cufflinks 3.966        
cufflinks 3.64        
cufflinks 3.541        
cufflinks 4.656        
cufflinks 4.252        
cufflinks 4.371        
cufflinks 4.561        
cufflinks 4.499        

0 Strain