Gene : Bradi5g18900 B. distachyon v3.1
Defline:  (1 of 1) K04569 - copper chaperone for superoxide dismutase (CCS) Genomic Order:  2187
Name:  ? Bradi5g18900 Secondary Identifier:  ? PAC:32810974
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g18900 0.5kb upstream 0.5kb upstream 6134 true Bd5: 22162310-22168443 Brachypodium distachyon
Bradi5g18900 0.5kb upstream 0.5kb upstream 500 false Bd5: 22162310-22162809 Brachypodium distachyon
Bradi5g18900 0.5kb downstream 0.5kb downstream 6134 true Bd5: 22162810-22168943 Brachypodium distachyon
Bradi5g18900 0.5kb downstream 0.5kb downstream 500 false Bd5: 22168444-22168943 Brachypodium distachyon
Bradi5g18900 1.0kb upstream 1.0kb upstream 6634 true Bd5: 22161810-22168443 Brachypodium distachyon
Bradi5g18900 1.0kb upstream 1.0kb upstream 1000 false Bd5: 22161810-22162809 Brachypodium distachyon
Bradi5g18900 1.0kb downstream 1.0kb downstream 6634 true Bd5: 22162810-22169443 Brachypodium distachyon
Bradi5g18900 1.0kb downstream 1.0kb downstream 1000 false Bd5: 22168444-22169443 Brachypodium distachyon
Bradi5g18900 2.0kb upstream 2.0kb upstream 7634 true Bd5: 22160810-22168443 Brachypodium distachyon
Bradi5g18900 2.0kb upstream 2.0kb upstream 2000 false Bd5: 22160810-22162809 Brachypodium distachyon
Bradi5g18900 2.0kb downstream 2.0kb downstream 7634 true Bd5: 22162810-22170443 Brachypodium distachyon
Bradi5g18900 2.0kb downstream 2.0kb downstream 2000 false Bd5: 22168444-22170443 Brachypodium distachyon
Bradi5g18900 5.0kb upstream 5.0kb upstream 10634 true Bd5: 22157810-22168443 Brachypodium distachyon
Bradi5g18900 5.0kb upstream 5.0kb upstream 5000 false Bd5: 22157810-22162809 Brachypodium distachyon
Bradi5g18900 5.0kb downstream 5.0kb downstream 10634 true Bd5: 22162810-22173443 Brachypodium distachyon
Bradi5g18900 5.0kb downstream 5.0kb downstream 5000 false Bd5: 22168444-22173443 Brachypodium distachyon
Bradi5g18900 10.0kb upstream 10.0kb upstream 15634 true Bd5: 22152810-22168443 Brachypodium distachyon
Bradi5g18900 10.0kb upstream 10.0kb upstream 10000 false Bd5: 22152810-22162809 Brachypodium distachyon
Bradi5g18900 10.0kb downstream 10.0kb downstream 15634 true Bd5: 22162810-22178443 Brachypodium distachyon
Bradi5g18900 10.0kb downstream 10.0kb downstream 10000 false Bd5: 22168444-22178443 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576422 5269 Grass View MSA
122046170 5273 Angiosperm View MSA
121346754 5274 Embryophyte View MSA
123425336 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.887        
cufflinks 4.319        
cufflinks 4.191        
cufflinks 4.75        
cufflinks 4.409        
cufflinks 4.385        
cufflinks 4.283        
cufflinks 4.289        
cufflinks 4.513        
cufflinks 3.944        
cufflinks 5.7        
cufflinks 4.515        
cufflinks 5.156        
cufflinks 5.435        
cufflinks 4.509        
cufflinks 4.357        
cufflinks 4.956        
cufflinks 1.896       Low
cufflinks 6.079        
cufflinks 4.08        
cufflinks 3.94        
cufflinks 3.826        
cufflinks 4.322        
cufflinks 4.644        
cufflinks 4.781        
cufflinks 4.106        
cufflinks 4.895        
cufflinks 4.116        
cufflinks 4.153        
cufflinks 3.23        

0 Strain