Gene : Bradi1g44047 B. distachyon v3.1
Defline:  (1 of 1) PTHR11353//PTHR11353:SF103 - CHAPERONIN Genomic Order:  5429
Name:  ? Bradi1g44047 Secondary Identifier:  ? PAC:32799798
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6352 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g44047 0.5kb upstream 0.5kb upstream 9001 true Bd1: 42265837-42274837 Brachypodium distachyon
Bradi1g44047 0.5kb upstream 0.5kb upstream 500 false Bd1: 42265837-42266336 Brachypodium distachyon
Bradi1g44047 0.5kb downstream 0.5kb downstream 9001 true Bd1: 42266337-42275337 Brachypodium distachyon
Bradi1g44047 0.5kb downstream 0.5kb downstream 500 false Bd1: 42274838-42275337 Brachypodium distachyon
Bradi1g44047 1.0kb upstream 1.0kb upstream 9501 true Bd1: 42265337-42274837 Brachypodium distachyon
Bradi1g44047 1.0kb upstream 1.0kb upstream 1000 false Bd1: 42265337-42266336 Brachypodium distachyon
Bradi1g44047 1.0kb downstream 1.0kb downstream 9501 true Bd1: 42266337-42275837 Brachypodium distachyon
Bradi1g44047 1.0kb downstream 1.0kb downstream 1000 false Bd1: 42274838-42275837 Brachypodium distachyon
Bradi1g44047 2.0kb upstream 2.0kb upstream 10501 true Bd1: 42264337-42274837 Brachypodium distachyon
Bradi1g44047 2.0kb upstream 2.0kb upstream 2000 false Bd1: 42264337-42266336 Brachypodium distachyon
Bradi1g44047 2.0kb downstream 2.0kb downstream 10501 true Bd1: 42266337-42276837 Brachypodium distachyon
Bradi1g44047 2.0kb downstream 2.0kb downstream 2000 false Bd1: 42274838-42276837 Brachypodium distachyon
Bradi1g44047 5.0kb upstream 5.0kb upstream 13501 true Bd1: 42261337-42274837 Brachypodium distachyon
Bradi1g44047 5.0kb upstream 5.0kb upstream 5000 false Bd1: 42261337-42266336 Brachypodium distachyon
Bradi1g44047 5.0kb downstream 5.0kb downstream 13501 true Bd1: 42266337-42279837 Brachypodium distachyon
Bradi1g44047 5.0kb downstream 5.0kb downstream 5000 false Bd1: 42274838-42279837 Brachypodium distachyon
Bradi1g44047 10.0kb upstream 10.0kb upstream 18501 true Bd1: 42256337-42274837 Brachypodium distachyon
Bradi1g44047 10.0kb upstream 10.0kb upstream 10000 false Bd1: 42256337-42266336 Brachypodium distachyon
Bradi1g44047 10.0kb downstream 10.0kb downstream 18501 true Bd1: 42266337-42284837 Brachypodium distachyon
Bradi1g44047 10.0kb downstream 10.0kb downstream 10000 false Bd1: 42274838-42284837 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028209 5273 Angiosperm View MSA
124583540 5269 Grass View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.723        
cufflinks 23.68     High  
cufflinks 26.725     High High
cufflinks 15.707     High  
cufflinks 4.657       Low
cufflinks 21.573     High  
cufflinks 19.92     High  
cufflinks 16.324     High  
cufflinks 19.056     High  
cufflinks 13.229     High  
cufflinks 17.905     High  
cufflinks 23.325     High  
cufflinks 22.968     High  
cufflinks 14.943     High  
cufflinks 11.421     High  
cufflinks 22.334     High  
cufflinks 8.953       Low
cufflinks 28.259     High High
cufflinks 9.63        
cufflinks 5.712       Low
cufflinks 11.431     High  
cufflinks 26.879     High High
cufflinks 15.356     High  
cufflinks 16.652     High  
cufflinks 16.484     High  
cufflinks 22.462     High  
cufflinks 21.751     High  
cufflinks 22.508     High  
cufflinks 23.42     High  
cufflinks 19.67     High  

0 Strain