Gene : Bradi1g44090 B. distachyon v3.1
Defline:  (1 of 2) K10808 - ribonucleoside-diphosphate reductase subunit M2 (RRM2) Genomic Order:  5434
Name:  ? Bradi1g44090 Secondary Identifier:  ? PAC:32794295
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7184 Brachypodium distachyon pathologic  
Bdistachyon PWY-7210 Brachypodium distachyon pathologic  
Bdistachyon PWY-7211 Brachypodium distachyon pathologic  
Bdistachyon PWY-7226 Brachypodium distachyon pathologic  
Bdistachyon PWY-7227 Brachypodium distachyon pathologic  
Bdistachyon PWY-7228 Brachypodium distachyon pathologic  
Bdistachyon PWY-7229 Brachypodium distachyon pathologic  
Bdistachyon PWY-841 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g44090 0.5kb upstream 0.5kb upstream 2089 true Bd1: 42325081-42327169 Brachypodium distachyon
Bradi1g44090 0.5kb upstream 0.5kb upstream 500 false Bd1: 42325081-42325580 Brachypodium distachyon
Bradi1g44090 0.5kb downstream 0.5kb downstream 2089 true Bd1: 42325581-42327669 Brachypodium distachyon
Bradi1g44090 0.5kb downstream 0.5kb downstream 500 false Bd1: 42327170-42327669 Brachypodium distachyon
Bradi1g44090 1.0kb upstream 1.0kb upstream 2589 true Bd1: 42324581-42327169 Brachypodium distachyon
Bradi1g44090 1.0kb upstream 1.0kb upstream 1000 false Bd1: 42324581-42325580 Brachypodium distachyon
Bradi1g44090 1.0kb downstream 1.0kb downstream 2589 true Bd1: 42325581-42328169 Brachypodium distachyon
Bradi1g44090 1.0kb downstream 1.0kb downstream 1000 false Bd1: 42327170-42328169 Brachypodium distachyon
Bradi1g44090 2.0kb upstream 2.0kb upstream 3589 true Bd1: 42323581-42327169 Brachypodium distachyon
Bradi1g44090 2.0kb upstream 2.0kb upstream 2000 false Bd1: 42323581-42325580 Brachypodium distachyon
Bradi1g44090 2.0kb downstream 2.0kb downstream 3589 true Bd1: 42325581-42329169 Brachypodium distachyon
Bradi1g44090 2.0kb downstream 2.0kb downstream 2000 false Bd1: 42327170-42329169 Brachypodium distachyon
Bradi1g44090 5.0kb upstream 5.0kb upstream 6589 true Bd1: 42320581-42327169 Brachypodium distachyon
Bradi1g44090 5.0kb upstream 5.0kb upstream 5000 false Bd1: 42320581-42325580 Brachypodium distachyon
Bradi1g44090 5.0kb downstream 5.0kb downstream 6589 true Bd1: 42325581-42332169 Brachypodium distachyon
Bradi1g44090 5.0kb downstream 5.0kb downstream 5000 false Bd1: 42327170-42332169 Brachypodium distachyon
Bradi1g44090 10.0kb upstream 10.0kb upstream 11589 true Bd1: 42315581-42327169 Brachypodium distachyon
Bradi1g44090 10.0kb upstream 10.0kb upstream 10000 false Bd1: 42315581-42325580 Brachypodium distachyon
Bradi1g44090 10.0kb downstream 10.0kb downstream 11589 true Bd1: 42325581-42337169 Brachypodium distachyon
Bradi1g44090 10.0kb downstream 10.0kb downstream 10000 false Bd1: 42327170-42337169 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585111 5269 Grass View MSA
122041688 5273 Angiosperm View MSA
121344906 5274 Embryophyte View MSA
123428543 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.357     High  
cufflinks 16.982     High  
cufflinks 10.147        
cufflinks 12.965     High  
cufflinks 2.106        
cufflinks 14.899     High  
cufflinks 19.108     High High
cufflinks 12.767     High  
cufflinks 17.334     High  
cufflinks 6.063        
cufflinks 0.674       Low
cufflinks 8.089        
cufflinks 0.97       Low
cufflinks 0.734       Low
cufflinks 2.065        
cufflinks 15.394     High  
cufflinks 12.355     High  
cufflinks 22.053     High High
cufflinks 4.416        
cufflinks 2.815        
cufflinks 17.252     High  
cufflinks 7.797        
cufflinks 7.954        
cufflinks 11.483     High  
cufflinks 15.589     High  
cufflinks 6.432        
cufflinks 1.317       Low
cufflinks 7.206        
cufflinks 8.939        
cufflinks 18.259     High High

0 Strain