Gene : Bradi1g44160 B. distachyon v3.1
Defline:  (1 of 1) PTHR14418 - CONDENSIN COMPLEX SUBUNIT 3-RELATED Genomic Order:  5443
Name:  ? Bradi1g44160 Secondary Identifier:  ? PAC:32799860
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g44160 0.5kb upstream 0.5kb upstream 7540 true Bd1: 42388343-42395882 Brachypodium distachyon
Bradi1g44160 0.5kb upstream 0.5kb upstream 500 false Bd1: 42395383-42395882 Brachypodium distachyon
Bradi1g44160 0.5kb downstream 0.5kb downstream 7540 true Bd1: 42387843-42395382 Brachypodium distachyon
Bradi1g44160 0.5kb downstream 0.5kb downstream 500 false Bd1: 42387843-42388342 Brachypodium distachyon
Bradi1g44160 1.0kb upstream 1.0kb upstream 8040 true Bd1: 42388343-42396382 Brachypodium distachyon
Bradi1g44160 1.0kb upstream 1.0kb upstream 1000 false Bd1: 42395383-42396382 Brachypodium distachyon
Bradi1g44160 1.0kb downstream 1.0kb downstream 8040 true Bd1: 42387343-42395382 Brachypodium distachyon
Bradi1g44160 1.0kb downstream 1.0kb downstream 1000 false Bd1: 42387343-42388342 Brachypodium distachyon
Bradi1g44160 2.0kb upstream 2.0kb upstream 9040 true Bd1: 42388343-42397382 Brachypodium distachyon
Bradi1g44160 2.0kb upstream 2.0kb upstream 2000 false Bd1: 42395383-42397382 Brachypodium distachyon
Bradi1g44160 2.0kb downstream 2.0kb downstream 9040 true Bd1: 42386343-42395382 Brachypodium distachyon
Bradi1g44160 2.0kb downstream 2.0kb downstream 2000 false Bd1: 42386343-42388342 Brachypodium distachyon
Bradi1g44160 5.0kb upstream 5.0kb upstream 12040 true Bd1: 42388343-42400382 Brachypodium distachyon
Bradi1g44160 5.0kb upstream 5.0kb upstream 5000 false Bd1: 42395383-42400382 Brachypodium distachyon
Bradi1g44160 5.0kb downstream 5.0kb downstream 12040 true Bd1: 42383343-42395382 Brachypodium distachyon
Bradi1g44160 5.0kb downstream 5.0kb downstream 5000 false Bd1: 42383343-42388342 Brachypodium distachyon
Bradi1g44160 10.0kb upstream 10.0kb upstream 17040 true Bd1: 42388343-42405382 Brachypodium distachyon
Bradi1g44160 10.0kb upstream 10.0kb upstream 10000 false Bd1: 42395383-42405382 Brachypodium distachyon
Bradi1g44160 10.0kb downstream 10.0kb downstream 17040 true Bd1: 42378343-42395382 Brachypodium distachyon
Bradi1g44160 10.0kb downstream 10.0kb downstream 10000 false Bd1: 42378343-42388342 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581302 5269 Grass View MSA
122047296 5273 Angiosperm View MSA
121344674 5274 Embryophyte View MSA
123424911 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.569        
cufflinks 2.58        
cufflinks 2.948       High
cufflinks 2.016        
cufflinks 0.831       Low
cufflinks 2.538        
cufflinks 2.339        
cufflinks 2.252        
cufflinks 2.117        
cufflinks 1.439        
cufflinks 1.356        
cufflinks 2.324        
cufflinks 1.002        
cufflinks 0.939       Low
cufflinks 1.01        
cufflinks 2.879       High
cufflinks 1.624        
cufflinks 3.319       High
cufflinks 1.419        
cufflinks 0.496       Low
cufflinks 1.448        
cufflinks 2.691        
cufflinks 1.992        
cufflinks 1.673        
cufflinks 2.04        
cufflinks 2.274        
cufflinks 0.863       Low
cufflinks 1.884        
cufflinks 2.123        
cufflinks 2.862       High

0 Strain