Gene : Bradi1g44890 B. distachyon v3.1
Defline:  (1 of 47) PF14416 - PMR5 N terminal Domain (PMR5N) Genomic Order:  5536
Name:  ? Bradi1g44890 Secondary Identifier:  ? PAC:32792639
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g44890 0.5kb upstream 0.5kb upstream 2641 true Bd1: 43139889-43142529 Brachypodium distachyon
Bradi1g44890 0.5kb upstream 0.5kb upstream 500 false Bd1: 43139889-43140388 Brachypodium distachyon
Bradi1g44890 0.5kb downstream 0.5kb downstream 2641 true Bd1: 43140389-43143029 Brachypodium distachyon
Bradi1g44890 0.5kb downstream 0.5kb downstream 500 false Bd1: 43142530-43143029 Brachypodium distachyon
Bradi1g44890 1.0kb upstream 1.0kb upstream 3141 true Bd1: 43139389-43142529 Brachypodium distachyon
Bradi1g44890 1.0kb upstream 1.0kb upstream 1000 false Bd1: 43139389-43140388 Brachypodium distachyon
Bradi1g44890 1.0kb downstream 1.0kb downstream 3141 true Bd1: 43140389-43143529 Brachypodium distachyon
Bradi1g44890 1.0kb downstream 1.0kb downstream 1000 false Bd1: 43142530-43143529 Brachypodium distachyon
Bradi1g44890 2.0kb upstream 2.0kb upstream 4141 true Bd1: 43138389-43142529 Brachypodium distachyon
Bradi1g44890 2.0kb upstream 2.0kb upstream 2000 false Bd1: 43138389-43140388 Brachypodium distachyon
Bradi1g44890 2.0kb downstream 2.0kb downstream 4141 true Bd1: 43140389-43144529 Brachypodium distachyon
Bradi1g44890 2.0kb downstream 2.0kb downstream 2000 false Bd1: 43142530-43144529 Brachypodium distachyon
Bradi1g44890 5.0kb upstream 5.0kb upstream 7141 true Bd1: 43135389-43142529 Brachypodium distachyon
Bradi1g44890 5.0kb upstream 5.0kb upstream 5000 false Bd1: 43135389-43140388 Brachypodium distachyon
Bradi1g44890 5.0kb downstream 5.0kb downstream 7141 true Bd1: 43140389-43147529 Brachypodium distachyon
Bradi1g44890 5.0kb downstream 5.0kb downstream 5000 false Bd1: 43142530-43147529 Brachypodium distachyon
Bradi1g44890 10.0kb upstream 10.0kb upstream 12141 true Bd1: 43130389-43142529 Brachypodium distachyon
Bradi1g44890 10.0kb upstream 10.0kb upstream 10000 false Bd1: 43130389-43140388 Brachypodium distachyon
Bradi1g44890 10.0kb downstream 10.0kb downstream 12141 true Bd1: 43140389-43152529 Brachypodium distachyon
Bradi1g44890 10.0kb downstream 10.0kb downstream 10000 false Bd1: 43142530-43152529 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124586216 5269 Grass View MSA
122044387 5273 Angiosperm View MSA
121310287 5274 Embryophyte View MSA
123347814 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.729        
cufflinks 1.455        
cufflinks 1.409        
cufflinks 1.568        
cufflinks 0.983        
cufflinks 1.582        
cufflinks 1.706        
cufflinks 1.399        
cufflinks 1.545        
cufflinks 1.225        
cufflinks 0.214       Low
cufflinks 1.318        
cufflinks 0.565        
cufflinks 0.335       Low
cufflinks 0.691        
cufflinks 1.427        
cufflinks 1.893        
cufflinks 2.634       High
cufflinks 1.617        
cufflinks 0.792        
cufflinks 2.667       High
cufflinks 1.467        
cufflinks 1.398        
cufflinks 1.439        
cufflinks 1.682        
cufflinks 1.227        
cufflinks 0.338       Low
cufflinks 1.417        
cufflinks 2.054        
cufflinks 2.967       High

0 Strain