Gene : Bradi1g44900 B. distachyon v3.1
Defline:  (1 of 47) PF14416 - PMR5 N terminal Domain (PMR5N) Genomic Order:  5537
Name:  ? Bradi1g44900 Secondary Identifier:  ? PAC:32799976
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g44900 0.5kb upstream 0.5kb upstream 2368 true Bd1: 43144704-43147071 Brachypodium distachyon
Bradi1g44900 0.5kb upstream 0.5kb upstream 500 false Bd1: 43144704-43145203 Brachypodium distachyon
Bradi1g44900 0.5kb downstream 0.5kb downstream 2368 true Bd1: 43145204-43147571 Brachypodium distachyon
Bradi1g44900 0.5kb downstream 0.5kb downstream 500 false Bd1: 43147072-43147571 Brachypodium distachyon
Bradi1g44900 1.0kb upstream 1.0kb upstream 2868 true Bd1: 43144204-43147071 Brachypodium distachyon
Bradi1g44900 1.0kb upstream 1.0kb upstream 1000 false Bd1: 43144204-43145203 Brachypodium distachyon
Bradi1g44900 1.0kb downstream 1.0kb downstream 2868 true Bd1: 43145204-43148071 Brachypodium distachyon
Bradi1g44900 1.0kb downstream 1.0kb downstream 1000 false Bd1: 43147072-43148071 Brachypodium distachyon
Bradi1g44900 2.0kb upstream 2.0kb upstream 3868 true Bd1: 43143204-43147071 Brachypodium distachyon
Bradi1g44900 2.0kb upstream 2.0kb upstream 2000 false Bd1: 43143204-43145203 Brachypodium distachyon
Bradi1g44900 2.0kb downstream 2.0kb downstream 3868 true Bd1: 43145204-43149071 Brachypodium distachyon
Bradi1g44900 2.0kb downstream 2.0kb downstream 2000 false Bd1: 43147072-43149071 Brachypodium distachyon
Bradi1g44900 5.0kb upstream 5.0kb upstream 6868 true Bd1: 43140204-43147071 Brachypodium distachyon
Bradi1g44900 5.0kb upstream 5.0kb upstream 5000 false Bd1: 43140204-43145203 Brachypodium distachyon
Bradi1g44900 5.0kb downstream 5.0kb downstream 6868 true Bd1: 43145204-43152071 Brachypodium distachyon
Bradi1g44900 5.0kb downstream 5.0kb downstream 5000 false Bd1: 43147072-43152071 Brachypodium distachyon
Bradi1g44900 10.0kb upstream 10.0kb upstream 11868 true Bd1: 43135204-43147071 Brachypodium distachyon
Bradi1g44900 10.0kb upstream 10.0kb upstream 10000 false Bd1: 43135204-43145203 Brachypodium distachyon
Bradi1g44900 10.0kb downstream 10.0kb downstream 11868 true Bd1: 43145204-43157071 Brachypodium distachyon
Bradi1g44900 10.0kb downstream 10.0kb downstream 10000 false Bd1: 43147072-43157071 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030324 5273 Angiosperm View MSA
124586698 5269 Grass View MSA
121299513 5274 Embryophyte View MSA
123337376 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.498       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain