Gene : Bradi1g39950 B. distachyon v3.1
Defline:  (1 of 1) PTHR12940 - ES-2 PROTEIN - RELATED Genomic Order:  5078
Name:  ? Bradi1g39950 Secondary Identifier:  ? PAC:32796597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g39950 0.5kb upstream 0.5kb upstream 3952 true Bd1: 36700232-36704183 Brachypodium distachyon
Bradi1g39950 0.5kb upstream 0.5kb upstream 500 false Bd1: 36700232-36700731 Brachypodium distachyon
Bradi1g39950 0.5kb downstream 0.5kb downstream 3952 true Bd1: 36700732-36704683 Brachypodium distachyon
Bradi1g39950 0.5kb downstream 0.5kb downstream 500 false Bd1: 36704184-36704683 Brachypodium distachyon
Bradi1g39950 1.0kb upstream 1.0kb upstream 4452 true Bd1: 36699732-36704183 Brachypodium distachyon
Bradi1g39950 1.0kb upstream 1.0kb upstream 1000 false Bd1: 36699732-36700731 Brachypodium distachyon
Bradi1g39950 1.0kb downstream 1.0kb downstream 4452 true Bd1: 36700732-36705183 Brachypodium distachyon
Bradi1g39950 1.0kb downstream 1.0kb downstream 1000 false Bd1: 36704184-36705183 Brachypodium distachyon
Bradi1g39950 2.0kb upstream 2.0kb upstream 5452 true Bd1: 36698732-36704183 Brachypodium distachyon
Bradi1g39950 2.0kb upstream 2.0kb upstream 2000 false Bd1: 36698732-36700731 Brachypodium distachyon
Bradi1g39950 2.0kb downstream 2.0kb downstream 5452 true Bd1: 36700732-36706183 Brachypodium distachyon
Bradi1g39950 2.0kb downstream 2.0kb downstream 2000 false Bd1: 36704184-36706183 Brachypodium distachyon
Bradi1g39950 5.0kb upstream 5.0kb upstream 8452 true Bd1: 36695732-36704183 Brachypodium distachyon
Bradi1g39950 5.0kb upstream 5.0kb upstream 5000 false Bd1: 36695732-36700731 Brachypodium distachyon
Bradi1g39950 5.0kb downstream 5.0kb downstream 8452 true Bd1: 36700732-36709183 Brachypodium distachyon
Bradi1g39950 5.0kb downstream 5.0kb downstream 5000 false Bd1: 36704184-36709183 Brachypodium distachyon
Bradi1g39950 10.0kb upstream 10.0kb upstream 13452 true Bd1: 36690732-36704183 Brachypodium distachyon
Bradi1g39950 10.0kb upstream 10.0kb upstream 10000 false Bd1: 36690732-36700731 Brachypodium distachyon
Bradi1g39950 10.0kb downstream 10.0kb downstream 13452 true Bd1: 36700732-36714183 Brachypodium distachyon
Bradi1g39950 10.0kb downstream 10.0kb downstream 10000 false Bd1: 36704184-36714183 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569668 5269 Grass View MSA
122046377 5273 Angiosperm View MSA
121346564 5274 Embryophyte View MSA
123426374 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.556        
cufflinks 3.375        
cufflinks 3.069        
cufflinks 2.442        
cufflinks 2.522        
cufflinks 2.979        
cufflinks 3.433        
cufflinks 3.477        
cufflinks 2.737        
cufflinks 2.149       Low
cufflinks 3.412        
cufflinks 3.11        
cufflinks 3.0        
cufflinks 2.567        
cufflinks 3.206        
cufflinks 3.653        
cufflinks 3.387        
cufflinks 5.416       High
cufflinks 6.348       High
cufflinks 5.292       High
cufflinks 5.251       High
cufflinks 2.854        
cufflinks 2.963        
cufflinks 2.56        
cufflinks 2.761        
cufflinks 3.036        
cufflinks 3.317        
cufflinks 3.026        
cufflinks 2.838        
cufflinks 3.853        

0 Strain