Gene : Bradi1g41010 B. distachyon v3.1
Defline:  (1 of 1) PTHR23105//PTHR23105:SF51 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER Genomic Order:  5105
Name:  ? Bradi1g41010 Secondary Identifier:  ? PAC:32797535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g41010 0.5kb upstream 0.5kb upstream 14259 true Bd1: 37721088-37735346 Brachypodium distachyon
Bradi1g41010 0.5kb upstream 0.5kb upstream 500 false Bd1: 37721088-37721587 Brachypodium distachyon
Bradi1g41010 0.5kb downstream 0.5kb downstream 14259 true Bd1: 37721588-37735846 Brachypodium distachyon
Bradi1g41010 0.5kb downstream 0.5kb downstream 500 false Bd1: 37735347-37735846 Brachypodium distachyon
Bradi1g41010 1.0kb upstream 1.0kb upstream 14759 true Bd1: 37720588-37735346 Brachypodium distachyon
Bradi1g41010 1.0kb upstream 1.0kb upstream 1000 false Bd1: 37720588-37721587 Brachypodium distachyon
Bradi1g41010 1.0kb downstream 1.0kb downstream 14759 true Bd1: 37721588-37736346 Brachypodium distachyon
Bradi1g41010 1.0kb downstream 1.0kb downstream 1000 false Bd1: 37735347-37736346 Brachypodium distachyon
Bradi1g41010 2.0kb upstream 2.0kb upstream 15759 true Bd1: 37719588-37735346 Brachypodium distachyon
Bradi1g41010 2.0kb upstream 2.0kb upstream 2000 false Bd1: 37719588-37721587 Brachypodium distachyon
Bradi1g41010 2.0kb downstream 2.0kb downstream 15759 true Bd1: 37721588-37737346 Brachypodium distachyon
Bradi1g41010 2.0kb downstream 2.0kb downstream 2000 false Bd1: 37735347-37737346 Brachypodium distachyon
Bradi1g41010 5.0kb upstream 5.0kb upstream 18759 true Bd1: 37716588-37735346 Brachypodium distachyon
Bradi1g41010 5.0kb upstream 5.0kb upstream 5000 false Bd1: 37716588-37721587 Brachypodium distachyon
Bradi1g41010 5.0kb downstream 5.0kb downstream 18759 true Bd1: 37721588-37740346 Brachypodium distachyon
Bradi1g41010 5.0kb downstream 5.0kb downstream 5000 false Bd1: 37735347-37740346 Brachypodium distachyon
Bradi1g41010 10.0kb upstream 10.0kb upstream 23759 true Bd1: 37711588-37735346 Brachypodium distachyon
Bradi1g41010 10.0kb upstream 10.0kb upstream 10000 false Bd1: 37711588-37721587 Brachypodium distachyon
Bradi1g41010 10.0kb downstream 10.0kb downstream 23759 true Bd1: 37721588-37745346 Brachypodium distachyon
Bradi1g41010 10.0kb downstream 10.0kb downstream 10000 false Bd1: 37735347-37745346 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589183 5269 Grass View MSA
122043496 5273 Angiosperm View MSA
121348791 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.317        
cufflinks 0.439        
cufflinks 0.402        
cufflinks 0.398        
cufflinks 0.188        
cufflinks 0.33        
cufflinks 0.351        
cufflinks 0.22        
cufflinks 0.292        
cufflinks 0.236        
cufflinks 0.194        
cufflinks 0.247        
cufflinks 0.131       Low
cufflinks 0.149       Low
cufflinks 0.161       Low
cufflinks 0.37        
cufflinks 0.326        
cufflinks 0.838       High
cufflinks 0.266        
cufflinks 0.094     Low Low
cufflinks 0.462        
cufflinks 0.321        
cufflinks 0.217        
cufflinks 0.264        
cufflinks 0.352        
cufflinks 0.361        
cufflinks 0.193        
cufflinks 0.338        
cufflinks 0.266        
cufflinks 0.419        

0 Strain