Gene : Bradi5g22250 B. distachyon v3.1
Defline:  (1 of 1) PTHR10578//PTHR10578:SF74 - S -2-HYDROXY-ACID OXIDASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2600
Name:  ? Bradi5g22250 Secondary Identifier:  ? PAC:32811958
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g22250 0.5kb upstream 0.5kb upstream 4126 true Bd5: 24848359-24852484 Brachypodium distachyon
Bradi5g22250 0.5kb upstream 0.5kb upstream 500 false Bd5: 24848359-24848858 Brachypodium distachyon
Bradi5g22250 0.5kb downstream 0.5kb downstream 4126 true Bd5: 24848859-24852984 Brachypodium distachyon
Bradi5g22250 0.5kb downstream 0.5kb downstream 500 false Bd5: 24852485-24852984 Brachypodium distachyon
Bradi5g22250 1.0kb upstream 1.0kb upstream 4626 true Bd5: 24847859-24852484 Brachypodium distachyon
Bradi5g22250 1.0kb upstream 1.0kb upstream 1000 false Bd5: 24847859-24848858 Brachypodium distachyon
Bradi5g22250 1.0kb downstream 1.0kb downstream 4626 true Bd5: 24848859-24853484 Brachypodium distachyon
Bradi5g22250 1.0kb downstream 1.0kb downstream 1000 false Bd5: 24852485-24853484 Brachypodium distachyon
Bradi5g22250 2.0kb upstream 2.0kb upstream 5626 true Bd5: 24846859-24852484 Brachypodium distachyon
Bradi5g22250 2.0kb upstream 2.0kb upstream 2000 false Bd5: 24846859-24848858 Brachypodium distachyon
Bradi5g22250 2.0kb downstream 2.0kb downstream 5626 true Bd5: 24848859-24854484 Brachypodium distachyon
Bradi5g22250 2.0kb downstream 2.0kb downstream 2000 false Bd5: 24852485-24854484 Brachypodium distachyon
Bradi5g22250 5.0kb upstream 5.0kb upstream 8626 true Bd5: 24843859-24852484 Brachypodium distachyon
Bradi5g22250 5.0kb upstream 5.0kb upstream 5000 false Bd5: 24843859-24848858 Brachypodium distachyon
Bradi5g22250 5.0kb downstream 5.0kb downstream 8626 true Bd5: 24848859-24857484 Brachypodium distachyon
Bradi5g22250 5.0kb downstream 5.0kb downstream 5000 false Bd5: 24852485-24857484 Brachypodium distachyon
Bradi5g22250 10.0kb upstream 10.0kb upstream 13626 true Bd5: 24838859-24852484 Brachypodium distachyon
Bradi5g22250 10.0kb upstream 10.0kb upstream 10000 false Bd5: 24838859-24848858 Brachypodium distachyon
Bradi5g22250 10.0kb downstream 10.0kb downstream 13626 true Bd5: 24848859-24862484 Brachypodium distachyon
Bradi5g22250 10.0kb downstream 10.0kb downstream 10000 false Bd5: 24852485-24862484 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570944 5269 Grass View MSA
122046790 5273 Angiosperm View MSA
121345614 5274 Embryophyte View MSA
123426843 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.168        
cufflinks 0.251        
cufflinks 0.242        
cufflinks 0.242        
cufflinks 0.571        
cufflinks 0.191        
cufflinks 0.177        
cufflinks 0.175        
cufflinks 0.211        
cufflinks 0.166        
cufflinks 0.37        
cufflinks 0.18        
cufflinks 0.156        
cufflinks 0.157        
cufflinks 0.194        
cufflinks 0.213        
cufflinks 0.196        
cufflinks 10.404       High
cufflinks 1.072       High
cufflinks 4.157       High
cufflinks 0.507        
cufflinks 0.179        
cufflinks 0.171        
cufflinks 0.105     Low Low
cufflinks 0.161        
cufflinks 0.234        
cufflinks 0.083     Low Low
cufflinks 0.285        
cufflinks 0.253        
cufflinks 0.123     Low  

0 Strain