Gene : Bradi5g22027 B. distachyon v3.1
Defline:  (1 of 1) PTHR31283:SF5 - PROTEIN F59A2.5 Genomic Order:  2569
Name:  ? Bradi5g22027 Secondary Identifier:  ? PAC:32806995
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g22027 0.5kb upstream 0.5kb upstream 2207 true Bd5: 24670611-24672817 Brachypodium distachyon
Bradi5g22027 0.5kb upstream 0.5kb upstream 500 false Bd5: 24670611-24671110 Brachypodium distachyon
Bradi5g22027 0.5kb downstream 0.5kb downstream 2207 true Bd5: 24671111-24673317 Brachypodium distachyon
Bradi5g22027 0.5kb downstream 0.5kb downstream 500 false Bd5: 24672818-24673317 Brachypodium distachyon
Bradi5g22027 1.0kb upstream 1.0kb upstream 2707 true Bd5: 24670111-24672817 Brachypodium distachyon
Bradi5g22027 1.0kb upstream 1.0kb upstream 1000 false Bd5: 24670111-24671110 Brachypodium distachyon
Bradi5g22027 1.0kb downstream 1.0kb downstream 2707 true Bd5: 24671111-24673817 Brachypodium distachyon
Bradi5g22027 1.0kb downstream 1.0kb downstream 1000 false Bd5: 24672818-24673817 Brachypodium distachyon
Bradi5g22027 2.0kb upstream 2.0kb upstream 3707 true Bd5: 24669111-24672817 Brachypodium distachyon
Bradi5g22027 2.0kb upstream 2.0kb upstream 2000 false Bd5: 24669111-24671110 Brachypodium distachyon
Bradi5g22027 2.0kb downstream 2.0kb downstream 3707 true Bd5: 24671111-24674817 Brachypodium distachyon
Bradi5g22027 2.0kb downstream 2.0kb downstream 2000 false Bd5: 24672818-24674817 Brachypodium distachyon
Bradi5g22027 5.0kb upstream 5.0kb upstream 6707 true Bd5: 24666111-24672817 Brachypodium distachyon
Bradi5g22027 5.0kb upstream 5.0kb upstream 5000 false Bd5: 24666111-24671110 Brachypodium distachyon
Bradi5g22027 5.0kb downstream 5.0kb downstream 6707 true Bd5: 24671111-24677817 Brachypodium distachyon
Bradi5g22027 5.0kb downstream 5.0kb downstream 5000 false Bd5: 24672818-24677817 Brachypodium distachyon
Bradi5g22027 10.0kb upstream 10.0kb upstream 11707 true Bd5: 24661111-24672817 Brachypodium distachyon
Bradi5g22027 10.0kb upstream 10.0kb upstream 10000 false Bd5: 24661111-24671110 Brachypodium distachyon
Bradi5g22027 10.0kb downstream 10.0kb downstream 11707 true Bd5: 24671111-24682817 Brachypodium distachyon
Bradi5g22027 10.0kb downstream 10.0kb downstream 10000 false Bd5: 24672818-24682817 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580259 5269 Grass View MSA
122043690 5273 Angiosperm View MSA
121347192 5274 Embryophyte View MSA
123380508 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.564        
cufflinks 3.364        
cufflinks 2.399        
cufflinks 4.374       High
cufflinks 1.998        
cufflinks 2.41        
cufflinks 3.08        
cufflinks 1.914        
cufflinks 1.728        
cufflinks 4.289       High
cufflinks 1.297        
cufflinks 1.159       Low
cufflinks 0.452       Low
cufflinks 1.097       Low
cufflinks 1.042       Low
cufflinks 1.955        
cufflinks 4.903       High
cufflinks 4.548       High
cufflinks 3.704        
cufflinks 2.592        
cufflinks 2.514        
cufflinks 1.626        
cufflinks 1.598        
cufflinks 1.463        
cufflinks 2.715        
cufflinks 4.015        
cufflinks 0.986       Low
cufflinks 2.695        
cufflinks 2.448        
cufflinks 2.461        

0 Strain