Gene : Bradi1g42030 B. distachyon v3.1
Defline:  (1 of 1) PTHR12735//PTHR12735:SF6 - BOLA-LIKE PROTEIN-RELATED Genomic Order:  5162
Name:  ? Bradi1g42030 Secondary Identifier:  ? PAC:32802297
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g42030 0.5kb upstream 0.5kb upstream 8421 true Bd1: 38977770-38986190 Brachypodium distachyon
Bradi1g42030 0.5kb upstream 0.5kb upstream 500 false Bd1: 38977770-38978269 Brachypodium distachyon
Bradi1g42030 0.5kb downstream 0.5kb downstream 8421 true Bd1: 38978270-38986690 Brachypodium distachyon
Bradi1g42030 0.5kb downstream 0.5kb downstream 500 false Bd1: 38986191-38986690 Brachypodium distachyon
Bradi1g42030 1.0kb upstream 1.0kb upstream 8921 true Bd1: 38977270-38986190 Brachypodium distachyon
Bradi1g42030 1.0kb upstream 1.0kb upstream 1000 false Bd1: 38977270-38978269 Brachypodium distachyon
Bradi1g42030 1.0kb downstream 1.0kb downstream 8921 true Bd1: 38978270-38987190 Brachypodium distachyon
Bradi1g42030 1.0kb downstream 1.0kb downstream 1000 false Bd1: 38986191-38987190 Brachypodium distachyon
Bradi1g42030 2.0kb upstream 2.0kb upstream 9921 true Bd1: 38976270-38986190 Brachypodium distachyon
Bradi1g42030 2.0kb upstream 2.0kb upstream 2000 false Bd1: 38976270-38978269 Brachypodium distachyon
Bradi1g42030 2.0kb downstream 2.0kb downstream 9921 true Bd1: 38978270-38988190 Brachypodium distachyon
Bradi1g42030 2.0kb downstream 2.0kb downstream 2000 false Bd1: 38986191-38988190 Brachypodium distachyon
Bradi1g42030 5.0kb upstream 5.0kb upstream 12921 true Bd1: 38973270-38986190 Brachypodium distachyon
Bradi1g42030 5.0kb upstream 5.0kb upstream 5000 false Bd1: 38973270-38978269 Brachypodium distachyon
Bradi1g42030 5.0kb downstream 5.0kb downstream 12921 true Bd1: 38978270-38991190 Brachypodium distachyon
Bradi1g42030 5.0kb downstream 5.0kb downstream 5000 false Bd1: 38986191-38991190 Brachypodium distachyon
Bradi1g42030 10.0kb upstream 10.0kb upstream 17921 true Bd1: 38968270-38986190 Brachypodium distachyon
Bradi1g42030 10.0kb upstream 10.0kb upstream 10000 false Bd1: 38968270-38978269 Brachypodium distachyon
Bradi1g42030 10.0kb downstream 10.0kb downstream 17921 true Bd1: 38978270-38996190 Brachypodium distachyon
Bradi1g42030 10.0kb downstream 10.0kb downstream 10000 false Bd1: 38986191-38996190 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026297 5273 Angiosperm View MSA
124570291 5269 Grass View MSA
121343923 5274 Embryophyte View MSA
123425423 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.798     High High
cufflinks 8.267        
cufflinks 5.049        
cufflinks 7.442        
cufflinks 5.983        
cufflinks 7.562        
cufflinks 9.241       High
cufflinks 4.912        
cufflinks 5.564        
cufflinks 4.715        
cufflinks 5.869        
cufflinks 6.289        
cufflinks 5.661        
cufflinks 6.458        
cufflinks 5.447        
cufflinks 7.073        
cufflinks 10.183       High
cufflinks 3.345       Low
cufflinks 14.174     High High
cufflinks 8.503        
cufflinks 5.74        
cufflinks 3.793       Low
cufflinks 4.126       Low
cufflinks 6.027        
cufflinks 7.738        
cufflinks 5.075        
cufflinks 6.189        
cufflinks 4.697        
cufflinks 4.589       Low
cufflinks 6.558        

0 Strain