Gene : Bradi1g42320 B. distachyon v3.1
Defline:  (1 of 1) PTHR13384:SF19 - G PATCH DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  5184
Name:  ? Bradi1g42320 Secondary Identifier:  ? PAC:32798140
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g42320 0.5kb upstream 0.5kb upstream 16533 true Bd1: 39478764-39495296 Brachypodium distachyon
Bradi1g42320 0.5kb upstream 0.5kb upstream 500 false Bd1: 39494797-39495296 Brachypodium distachyon
Bradi1g42320 0.5kb downstream 0.5kb downstream 16533 true Bd1: 39478264-39494796 Brachypodium distachyon
Bradi1g42320 0.5kb downstream 0.5kb downstream 500 false Bd1: 39478264-39478763 Brachypodium distachyon
Bradi1g42320 1.0kb upstream 1.0kb upstream 17033 true Bd1: 39478764-39495796 Brachypodium distachyon
Bradi1g42320 1.0kb upstream 1.0kb upstream 1000 false Bd1: 39494797-39495796 Brachypodium distachyon
Bradi1g42320 1.0kb downstream 1.0kb downstream 17033 true Bd1: 39477764-39494796 Brachypodium distachyon
Bradi1g42320 1.0kb downstream 1.0kb downstream 1000 false Bd1: 39477764-39478763 Brachypodium distachyon
Bradi1g42320 2.0kb upstream 2.0kb upstream 18033 true Bd1: 39478764-39496796 Brachypodium distachyon
Bradi1g42320 2.0kb upstream 2.0kb upstream 2000 false Bd1: 39494797-39496796 Brachypodium distachyon
Bradi1g42320 2.0kb downstream 2.0kb downstream 18033 true Bd1: 39476764-39494796 Brachypodium distachyon
Bradi1g42320 2.0kb downstream 2.0kb downstream 2000 false Bd1: 39476764-39478763 Brachypodium distachyon
Bradi1g42320 5.0kb upstream 5.0kb upstream 21033 true Bd1: 39478764-39499796 Brachypodium distachyon
Bradi1g42320 5.0kb upstream 5.0kb upstream 5000 false Bd1: 39494797-39499796 Brachypodium distachyon
Bradi1g42320 5.0kb downstream 5.0kb downstream 21033 true Bd1: 39473764-39494796 Brachypodium distachyon
Bradi1g42320 5.0kb downstream 5.0kb downstream 5000 false Bd1: 39473764-39478763 Brachypodium distachyon
Bradi1g42320 10.0kb upstream 10.0kb upstream 26033 true Bd1: 39478764-39504796 Brachypodium distachyon
Bradi1g42320 10.0kb upstream 10.0kb upstream 10000 false Bd1: 39494797-39504796 Brachypodium distachyon
Bradi1g42320 10.0kb downstream 10.0kb downstream 26033 true Bd1: 39468764-39494796 Brachypodium distachyon
Bradi1g42320 10.0kb downstream 10.0kb downstream 10000 false Bd1: 39468764-39478763 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578949 5269 Grass View MSA
122044115 5273 Angiosperm View MSA
121345398 5274 Embryophyte View MSA
123424133 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.629        
cufflinks 0.906        
cufflinks 0.985        
cufflinks 0.724        
cufflinks 0.388       Low
cufflinks 0.856        
cufflinks 0.76        
cufflinks 0.703        
cufflinks 0.825        
cufflinks 0.744        
cufflinks 0.935        
cufflinks 0.861        
cufflinks 0.836        
cufflinks 0.72        
cufflinks 0.588        
cufflinks 0.881        
cufflinks 0.514        
cufflinks 1.058       High
cufflinks 0.58        
cufflinks 0.443       Low
cufflinks 0.614        
cufflinks 1.155       High
cufflinks 0.738        
cufflinks 0.759        
cufflinks 0.728        
cufflinks 0.91        
cufflinks 0.957        
cufflinks 0.872        
cufflinks 0.924        
cufflinks 0.829        

0 Strain