Gene : Bradi5g21620 B. distachyon v3.1
Defline:  (1 of 4) KOG3036 - Protein involved in cell differentiation/sexual development Genomic Order:  2516
Name:  ? Bradi5g21620 Secondary Identifier:  ? PAC:32808228
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g21620 0.5kb upstream 0.5kb upstream 4451 true Bd5: 24342136-24346586 Brachypodium distachyon
Bradi5g21620 0.5kb upstream 0.5kb upstream 500 false Bd5: 24346087-24346586 Brachypodium distachyon
Bradi5g21620 0.5kb downstream 0.5kb downstream 4451 true Bd5: 24341636-24346086 Brachypodium distachyon
Bradi5g21620 0.5kb downstream 0.5kb downstream 500 false Bd5: 24341636-24342135 Brachypodium distachyon
Bradi5g21620 1.0kb upstream 1.0kb upstream 4951 true Bd5: 24342136-24347086 Brachypodium distachyon
Bradi5g21620 1.0kb upstream 1.0kb upstream 1000 false Bd5: 24346087-24347086 Brachypodium distachyon
Bradi5g21620 1.0kb downstream 1.0kb downstream 4951 true Bd5: 24341136-24346086 Brachypodium distachyon
Bradi5g21620 1.0kb downstream 1.0kb downstream 1000 false Bd5: 24341136-24342135 Brachypodium distachyon
Bradi5g21620 2.0kb upstream 2.0kb upstream 5951 true Bd5: 24342136-24348086 Brachypodium distachyon
Bradi5g21620 2.0kb upstream 2.0kb upstream 2000 false Bd5: 24346087-24348086 Brachypodium distachyon
Bradi5g21620 2.0kb downstream 2.0kb downstream 5951 true Bd5: 24340136-24346086 Brachypodium distachyon
Bradi5g21620 2.0kb downstream 2.0kb downstream 2000 false Bd5: 24340136-24342135 Brachypodium distachyon
Bradi5g21620 5.0kb upstream 5.0kb upstream 8951 true Bd5: 24342136-24351086 Brachypodium distachyon
Bradi5g21620 5.0kb upstream 5.0kb upstream 5000 false Bd5: 24346087-24351086 Brachypodium distachyon
Bradi5g21620 5.0kb downstream 5.0kb downstream 8951 true Bd5: 24337136-24346086 Brachypodium distachyon
Bradi5g21620 5.0kb downstream 5.0kb downstream 5000 false Bd5: 24337136-24342135 Brachypodium distachyon
Bradi5g21620 10.0kb upstream 10.0kb upstream 13951 true Bd5: 24342136-24356086 Brachypodium distachyon
Bradi5g21620 10.0kb upstream 10.0kb upstream 10000 false Bd5: 24346087-24356086 Brachypodium distachyon
Bradi5g21620 10.0kb downstream 10.0kb downstream 13951 true Bd5: 24332136-24346086 Brachypodium distachyon
Bradi5g21620 10.0kb downstream 10.0kb downstream 10000 false Bd5: 24332136-24342135 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575599 5269 Grass View MSA
122043480 5273 Angiosperm View MSA
121346204 5274 Embryophyte View MSA
123424774 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.211       Low
cufflinks 3.295        
cufflinks 3.157        
cufflinks 2.968        
cufflinks 2.842        
cufflinks 2.924        
cufflinks 3.36        
cufflinks 2.138        
cufflinks 2.567        
cufflinks 2.209        
cufflinks 1.397        
cufflinks 2.401        
cufflinks 0.923       Low
cufflinks 1.068       Low
cufflinks 0.957       Low
cufflinks 2.241        
cufflinks 2.217        
cufflinks 3.116        
cufflinks 5.217       High
cufflinks 1.552        
cufflinks 2.578        
cufflinks 3.111        
cufflinks 2.147        
cufflinks 2.105        
cufflinks 2.772        
cufflinks 3.137        
cufflinks 0.999       Low
cufflinks 2.816        
cufflinks 2.694        
cufflinks 3.001        

0 Strain