Gene : Bradi5g21161 B. distachyon v3.1
Genomic Order:  2458 Name:  ? Bradi5g21161
Secondary Identifier:  ? PAC:32809761
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi5g21161 0.5kb upstream 0.5kb upstream 2546 true Bd5: 24056280-24058825 Brachypodium distachyon
Bradi5g21161 0.5kb upstream 0.5kb upstream 500 false Bd5: 24058326-24058825 Brachypodium distachyon
Bradi5g21161 0.5kb downstream 0.5kb downstream 2546 true Bd5: 24055780-24058325 Brachypodium distachyon
Bradi5g21161 0.5kb downstream 0.5kb downstream 500 false Bd5: 24055780-24056279 Brachypodium distachyon
Bradi5g21161 1.0kb upstream 1.0kb upstream 3046 true Bd5: 24056280-24059325 Brachypodium distachyon
Bradi5g21161 1.0kb upstream 1.0kb upstream 1000 false Bd5: 24058326-24059325 Brachypodium distachyon
Bradi5g21161 1.0kb downstream 1.0kb downstream 3046 true Bd5: 24055280-24058325 Brachypodium distachyon
Bradi5g21161 1.0kb downstream 1.0kb downstream 1000 false Bd5: 24055280-24056279 Brachypodium distachyon
Bradi5g21161 2.0kb upstream 2.0kb upstream 4046 true Bd5: 24056280-24060325 Brachypodium distachyon
Bradi5g21161 2.0kb upstream 2.0kb upstream 2000 false Bd5: 24058326-24060325 Brachypodium distachyon
Bradi5g21161 2.0kb downstream 2.0kb downstream 4046 true Bd5: 24054280-24058325 Brachypodium distachyon
Bradi5g21161 2.0kb downstream 2.0kb downstream 2000 false Bd5: 24054280-24056279 Brachypodium distachyon
Bradi5g21161 5.0kb upstream 5.0kb upstream 7046 true Bd5: 24056280-24063325 Brachypodium distachyon
Bradi5g21161 5.0kb upstream 5.0kb upstream 5000 false Bd5: 24058326-24063325 Brachypodium distachyon
Bradi5g21161 5.0kb downstream 5.0kb downstream 7046 true Bd5: 24051280-24058325 Brachypodium distachyon
Bradi5g21161 5.0kb downstream 5.0kb downstream 5000 false Bd5: 24051280-24056279 Brachypodium distachyon
Bradi5g21161 10.0kb upstream 10.0kb upstream 12046 true Bd5: 24056280-24068325 Brachypodium distachyon
Bradi5g21161 10.0kb upstream 10.0kb upstream 10000 false Bd5: 24058326-24068325 Brachypodium distachyon
Bradi5g21161 10.0kb downstream 10.0kb downstream 12046 true Bd5: 24046280-24058325 Brachypodium distachyon
Bradi5g21161 10.0kb downstream 10.0kb downstream 10000 false Bd5: 24046280-24056279 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994129 5273 Angiosperm View MSA
124583005 5269 Grass View MSA
121264367 5274 Embryophyte View MSA
123302820 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.446        
cufflinks 1.332        
cufflinks 1.028        
cufflinks 1.31        
cufflinks 0.307       Low
cufflinks 0.982        
cufflinks 1.387       High
cufflinks 0.793        
cufflinks 0.974        
cufflinks 1.042        
cufflinks 0.652        
cufflinks 0.573        
cufflinks 0.39       Low
cufflinks 0.67        
cufflinks 0.575        
cufflinks 0.565        
cufflinks 1.549       High
cufflinks 2.53       High
cufflinks 1.337        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.707        
cufflinks 0.994        
cufflinks 0.548        
cufflinks 0.572        
cufflinks 0.686        
cufflinks 1.174        
cufflinks 0.775        
cufflinks 1.365        
cufflinks 1.338        
cufflinks 0.698        

0 Strain