Gene : Bradi1g42420 B. distachyon v3.1
Defline:  (1 of 1) K13128 - zinc finger CCHC domain-containing protein 8 (ZCCHC8) Genomic Order:  5201
Name:  ? Bradi1g42420 Secondary Identifier:  ? PAC:32801471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi1g42420 0.5kb upstream 0.5kb upstream 9935 true Bd1: 39643708-39653642 Brachypodium distachyon
Bradi1g42420 0.5kb upstream 0.5kb upstream 500 false Bd1: 39643708-39644207 Brachypodium distachyon
Bradi1g42420 0.5kb downstream 0.5kb downstream 9935 true Bd1: 39644208-39654142 Brachypodium distachyon
Bradi1g42420 0.5kb downstream 0.5kb downstream 500 false Bd1: 39653643-39654142 Brachypodium distachyon
Bradi1g42420 1.0kb upstream 1.0kb upstream 10435 true Bd1: 39643208-39653642 Brachypodium distachyon
Bradi1g42420 1.0kb upstream 1.0kb upstream 1000 false Bd1: 39643208-39644207 Brachypodium distachyon
Bradi1g42420 1.0kb downstream 1.0kb downstream 10435 true Bd1: 39644208-39654642 Brachypodium distachyon
Bradi1g42420 1.0kb downstream 1.0kb downstream 1000 false Bd1: 39653643-39654642 Brachypodium distachyon
Bradi1g42420 2.0kb upstream 2.0kb upstream 11435 true Bd1: 39642208-39653642 Brachypodium distachyon
Bradi1g42420 2.0kb upstream 2.0kb upstream 2000 false Bd1: 39642208-39644207 Brachypodium distachyon
Bradi1g42420 2.0kb downstream 2.0kb downstream 11435 true Bd1: 39644208-39655642 Brachypodium distachyon
Bradi1g42420 2.0kb downstream 2.0kb downstream 2000 false Bd1: 39653643-39655642 Brachypodium distachyon
Bradi1g42420 5.0kb upstream 5.0kb upstream 14435 true Bd1: 39639208-39653642 Brachypodium distachyon
Bradi1g42420 5.0kb upstream 5.0kb upstream 5000 false Bd1: 39639208-39644207 Brachypodium distachyon
Bradi1g42420 5.0kb downstream 5.0kb downstream 14435 true Bd1: 39644208-39658642 Brachypodium distachyon
Bradi1g42420 5.0kb downstream 5.0kb downstream 5000 false Bd1: 39653643-39658642 Brachypodium distachyon
Bradi1g42420 10.0kb upstream 10.0kb upstream 19435 true Bd1: 39634208-39653642 Brachypodium distachyon
Bradi1g42420 10.0kb upstream 10.0kb upstream 10000 false Bd1: 39634208-39644207 Brachypodium distachyon
Bradi1g42420 10.0kb downstream 10.0kb downstream 19435 true Bd1: 39644208-39663642 Brachypodium distachyon
Bradi1g42420 10.0kb downstream 10.0kb downstream 10000 false Bd1: 39653643-39663642 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568294 5269 Grass View MSA
122044061 5273 Angiosperm View MSA
121350555 5274 Embryophyte View MSA
123424500 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.547        
cufflinks 4.692        
cufflinks 4.884        
cufflinks 3.459        
cufflinks 2.315        
cufflinks 3.951        
cufflinks 3.736        
cufflinks 3.601        
cufflinks 3.937        
cufflinks 2.721        
cufflinks 3.487        
cufflinks 4.098        
cufflinks 2.81        
cufflinks 2.544        
cufflinks 2.936        
cufflinks 4.331        
cufflinks 3.681        
cufflinks 7.328       High
cufflinks 4.931        
cufflinks 1.042       Low
cufflinks 3.462        
cufflinks 4.644        
cufflinks 3.487        
cufflinks 3.579        
cufflinks 3.274        
cufflinks 4.007        
cufflinks 3.61        
cufflinks 3.828        
cufflinks 3.971        
cufflinks 4.638        

0 Strain